Pairwise Alignments

Query, 592 a.a., acyl-CoA dehydrogenase domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 592 a.a., Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) from Pseudomonas simiae WCS417

 Score =  575 bits (1481), Expect = e-168
 Identities = 300/599 (50%), Positives = 399/599 (66%), Gaps = 14/599 (2%)

Query: 1   MPTYTAPTKDMQFLLHDVLQVSQN--DIPGY-DELDRDFTGAVLDEAGKLAMEVLHPLNT 57
           M  Y AP +DM+F+L++V +V+     +P   D +D +   A+L+EAGK+  + + PL+ 
Sbjct: 1   MADYKAPLRDMRFVLNEVFEVATTWAQLPALADTVDAETVEAILEEAGKVTAKSIAPLSR 60

Query: 58  VGDQQGCVLENGVVRTPEGFKDAYKIMCDGGWTGLDMDPEYGGQGMPYILQTATGEMFSA 117
            GD+QGC  +N  V TP+GF  AY     GGW G+  DP +GG GMP  +     EM ++
Sbjct: 61  GGDEQGCRWDNTAVFTPDGFPQAYATYAQGGWVGVGGDPIFGGMGMPKAVSAQVEEMINS 120

Query: 118 ANMAFQMYNGLTHGAMSALAEHGSDQQKATYLPKMIAGNWTGTMNLTEPQCGTDLGLIRT 177
           +++AF +Y  LT GA  ++  H S+  KATYLPKM +G W+G+M LTE   GTDLG+IRT
Sbjct: 121 SSLAFGLYPMLTSGACVSINTHASEALKATYLPKMYSGEWSGSMCLTEAHAGTDLGIIRT 180

Query: 178 KAEPQEDGSYAITGQKIWISAGEHDMSENIIHLVLAKIPGGPEGVKGISLFIVPKFLVND 237
           KAEPQ DGSY ++G KI+I+ GEHD+++NIIHLVLAK+P  P G KGISLF+VPKF+VN 
Sbjct: 181 KAEPQADGSYKVSGTKIFITGGEHDLTDNIIHLVLAKLPDAPAGPKGISLFLVPKFMVNA 240

Query: 238 DGSLGARNAVSCGGLEHKMGIHGNATCVMNYDGATGFLVGEMHKGLRAMFTMMNEARLSV 297
           DGSLGARN VSCG +EHKMGI  +ATCVMN+D A G+LVGE ++GL AMFTMMN  RL V
Sbjct: 241 DGSLGARNTVSCGSIEHKMGIQASATCVMNFDEAVGYLVGEPNRGLAAMFTMMNYERLGV 300

Query: 298 ALQGYAQGDIAYQNALGFARDRLQGRDITGAQAPNKPADPIIVHPDVRRNLMDQKSFVEG 357
            +QG A G+ +YQNA+ +ARDRLQ R  TGAQA +K ADPIIVHPDVRR L+  K+  EG
Sbjct: 301 GIQGLASGERSYQNAIEYARDRLQSRAPTGAQAQDKMADPIIVHPDVRRMLLTMKAANEG 360

Query: 358 ARALVFWGATLIDQAHRCKDA----EADAMISLLIPVMKGFLTDKGFETTVLAQQTLGGS 413
            RA   + AT +D A    DA     AD +++LL PV K FL+D G ETTVL QQ  GG 
Sbjct: 361 GRAFSTYVATQLDIAKFSDDAAARERADNLVALLTPVAKAFLSDLGLETTVLGQQVFGGH 420

Query: 414 GFTREWGLEQFVRDARIAMIYEGTNGIQSLDLVGRKLGLNGGKTVMAFFDMVKTFLKENE 473
           G+ REWG EQ VRD RI  IYEGTNGIQ+LDL+GRK+  +GG     F D ++ F+  + 
Sbjct: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKIVGSGGAFYTLFADEIRGFIASS- 479

Query: 474 DNAELKSGFLDPLKAASKDLQAAGMYFMSDGMKNPNNALSGSYDFMHLFGHVCLGLMWAR 533
              EL + F  PL AA  +L     + +     NPN   + S +++H FG++    MWAR
Sbjct: 480 -GTEL-AEFTKPLSAAVDNLDELTAWVLDRAKTNPNEIGAASVEYLHAFGYMAYAYMWAR 537

Query: 534 MAKASIAALEAGDTDTDFHATKIATGRYYMSRQLPMTGTHLARIMSGAEPVMALDAANF 592
           MAKA++      +++ DF+A+K+ T R+Y +R LP   +  A + +G+E +  LD A F
Sbjct: 538 MAKAALGK----ESEEDFYASKLGTARFYFARLLPRIHSLSASVKAGSESLFLLDEALF 592