Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 558 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  247 bits (630), Expect = 1e-69
 Identities = 174/543 (32%), Positives = 263/543 (48%), Gaps = 22/543 (4%)

Query: 9   GLDKCAANYVPLTPLSHLARAALVYPDREAVVY-----GARRFTYAEYHARVSRLASALA 63
           G      N   L   + +  AA  + D+E +VY     G  R+TYA+ +ARV R A+AL 
Sbjct: 13  GCPSTTGNERQLNTTTLIRHAARTHGDQE-IVYRTPDGGWDRYTYADCYARVCRSANALR 71

Query: 64  GAGIAPGDVVATLLPNIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLV 123
             G+ PGD V  L  N     E ++ +P  GAV+  +N+RL  + + Y++ H     V V
Sbjct: 72  ALGVEPGDRVGILDWNSRRHFELYWSIPGLGAVMLQMNLRLGPEDLGYVVDHSKVSYVCV 131

Query: 124 DSQFLPLA---AEACERLDGPAPLLIEVADDAAGVHALGGYTEYEDFLAGGDPDFPWIMP 180
           D   LPLA   A    ++ G   +  +  D       L     YED LA  D    W  P
Sbjct: 132 DESLLPLAESVAANSPQIKGWIVMTDKPLDQIKTT--LKPLLHYEDLLAAADTKIDW--P 187

Query: 181 R-DEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVLYPRWLAIVPLFHCNG 239
             DE  + +  YT+GTTG+PKGV Y HRG YL +     +  M L    + I P+FH   
Sbjct: 188 EIDETSAYSACYTTGTTGKPKGVYYSHRGIYLHSTAMATNLGMTLDDCVMLITPMFHGQC 247

Query: 240 WNHSWMMPMLGGTVVCCRDVSAQ---AIYTAIAENGVTHFGGAPIVLNMIVNAPDA--AR 294
           W       +L   +V      A+    +  A+   GVT   GAP +   ++   +    +
Sbjct: 248 WGLPQAATLLADKIVLPGRYVAEDTKPLVDAMIAEGVTIANGAPAIFQPMLQYIETMPVK 307

Query: 295 RPFSHTVEVFTAGAPPAAATLAAIEELGFNVTQVYGLTETYGHVT-ECVWNPDWDTLPQA 353
             FS    +  A  PP +  +   +  G  V   YG TE    VT   + +     L + 
Sbjct: 308 PDFSRMRMLSGATEPPLSMMIGFYDLTGAEVVHAYGATEATTLVTMNRLKSTLKKRLTEE 367

Query: 354 ERAAIKARQGVALPQMEHITVMDPEMRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEA 413
           E+  +K +QG+ L  ++ I ++D + + +P DG + GE+ +RG  +   Y+  PD+    
Sbjct: 368 EKWNLKRKQGLVLTGVD-IRILDADDKDLPHDGKSAGEICLRGPWITARYHDMPDSADRF 426

Query: 414 FAGGYFHSGDIALQHPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAK 473
             GG++ SGD+     +GY+++ DR KD+I SGGE ISS+++E  LM HPAV   AVV  
Sbjct: 427 LEGGWWRSGDVGTVDENGYLKVTDRIKDVIKSGGEWISSIDMENLLMGHPAVRDAAVVGI 486

Query: 474 PDPTWGEVPCAFVELKDGKTAEEAEIIAFARERLAGFKTPKKVVFTE-LPKTSTGKIQKF 532
           P   W E P A V L+ G+ A + ++        A ++ P +V+F E +PKTS GK+ K 
Sbjct: 487 PHAKWQERPLALVVLRPGQQATQEQLQEHLTSAFAKWQLPDQVLFVEAIPKTSVGKLDKK 546

Query: 533 ELR 535
            +R
Sbjct: 547 RIR 549