Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 541 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

 Score =  231 bits (590), Expect = 4e-65
 Identities = 163/530 (30%), Positives = 256/530 (48%), Gaps = 21/530 (3%)

Query: 19  PLTPLSHLARAALVYPDREAVVY----GARRFTYAEYHARVSRLASALAGAGIAPGDVVA 74
           PL   S +A AA  + D   V      G    T+ +      RL+SALA  G+  G+  A
Sbjct: 4   PLLVSSLIAHAARYHADTPVVSVNTTGGIEHTTWGQVEINARRLSSALAKLGVQSGERCA 63

Query: 75  TLLPNIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEA 134
           T+  N    +E ++GV   G V +T+N RL  +T+ YI++H   + + +D  FLP+ A+ 
Sbjct: 64  TIAWNNRRHLEIYYGVSGAGMVCHTVNPRLSAETLIYIVNHADDQVLFIDRTFLPIVAKL 123

Query: 135 CERLDGPAPLLIEVADDAAGVHALGGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSG 194
              L     +++    D      L G   Y++ +A GD D+PW    ++  S +L YTSG
Sbjct: 124 RSALSTVKHVILMGPRDEEASGMLDGLRFYDEVVASGDADYPWPSIDEDLPS-SLCYTSG 182

Query: 195 TTGRPKGVVYHHRGAYLMTM------GTVISWRMVLYPRWLAIVPLFHCNGWNHSWMMPM 248
           TTG PKGV+Y HR   L  +      G  +S R  + P    +VP+FH N W   ++   
Sbjct: 183 TTGHPKGVLYSHRSTVLHALAGNSPDGIGVSARDAVMP----VVPMFHVNAWGVPYIAAA 238

Query: 249 LGGTVVCCR-DVSAQAIYTAIAENGVTHFGGAPIV-LNMIVNAPDAARRPFSHTVEVFTA 306
            G  +V    ++   ++ T I +  V    G P + + ++        +P S    +   
Sbjct: 239 QGAKLVLPGPNLDGPSLATLIDDEEVGLALGVPTIWMGLLAALRARGTKPKSLKRTIVGG 298

Query: 307 GAPPAAATLAAIEELGFNVTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVAL 366
            A P +   A  +E G  +   +G+TET    T          L    ++ ++  QG   
Sbjct: 299 AALPPSMFAAFRDEFGVELIHAWGMTETSPLGTLNQPLARHIHLDPQRQSEVRLGQGRP- 357

Query: 367 PQMEHITVMDPEMRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIAL 426
           P    + V+D     +P DG + G++ +RG+ ++  Y+    +   +   G+F +GDIA 
Sbjct: 358 PYGVQLRVVDDGGAVLPNDGKSPGKLQIRGHWIVSSYFGAESSALTS--DGWFDTGDIAT 415

Query: 427 QHPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFV 486
              +GY+ I DRAKDII SGGE ISSV++E   + HPA+   A +  P P W E P    
Sbjct: 416 LDANGYMVIRDRAKDIIKSGGEWISSVDIENIAIGHPAIANAAAIGVPHPKWDERPVLVA 475

Query: 487 ELKDGKTAEEAEIIAFARERLAGFKTPKKVVFTE-LPKTSTGKIQKFELR 535
             K+G    EA+++AF + RL  ++ P K VF + LP + TGK+ K  LR
Sbjct: 476 VKKEGANVSEADLLAFFKGRLPDWQIPDKAVFIDALPLSGTGKVFKNRLR 525