Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  239 bits (610), Expect = 2e-67
 Identities = 180/519 (34%), Positives = 247/519 (47%), Gaps = 27/519 (5%)

Query: 26  LARAALVYPDREAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVE 85
           L R+   +PD+ AV +  R  ++ +Y  RV+RLA AL   G+ PGD VA L  N    +E
Sbjct: 7   LHRSVQQHPDKVAVRFAGRTRSFRDYADRVARLAGALRRLGMQPGDRVAMLALNSDRYLE 66

Query: 86  AHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAPLL 145
               VP  G VLN  NIR     + Y L   G+  +LVD  F  L     E++ G A  L
Sbjct: 67  YQMAVPWGGGVLNPCNIRWSAAEILYSLEDSGSTILLVDENFRALV----EQMRGQATSL 122

Query: 146 IEV---ADDA--AGVHALGGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPK 200
            EV    D A  AG+H       YE  +    P  P    RDE +   + YT GTTG PK
Sbjct: 123 REVIYCGDGALPAGMHG------YEALIDAAAP-VPDTARRDE-DLAGIFYTGGTTGFPK 174

Query: 201 GVVYHHRGAYLMTMGTVISWRMVLYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVS 260
           GV+  H          +          +L   P+FH      +      G T V     S
Sbjct: 175 GVMLSHTNICSSGFAALGEGLAPPDSSYLHAAPMFHLADMGLATPHWFQGSTHVIVPSFS 234

Query: 261 AQAIYTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLA--AI 318
            +A+  AIA + VTH    P ++ M+V+ P         ++   T GA P +  +   A+
Sbjct: 235 PEAVLNAIAADRVTHALLVPTMIQMLVDHPSMREPRDLRSLRCITYGASPISEAVLNRAM 294

Query: 319 EEL-GFNVTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDP 377
           E   G    Q YG+TE     T    NP  +   +  +       G A   ME + ++D 
Sbjct: 295 EAFPGVEFAQAYGMTELSPIATI---NPPSNHTAEGRKRGKLRSAGRASYCME-VRIVDA 350

Query: 378 EMRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQHPDGYIQIAD 437
           +  +VP    T GEV +RG +VM+GY+  P+ TA A   G+ H+GD A    DGYI + D
Sbjct: 351 DGAEVPR--GTVGEVAVRGPNVMQGYWNKPEQTAAAVRDGWMHTGDGAYMDDDGYIFVVD 408

Query: 438 RAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEA 497
           R KD+IISGGEN+ S EVE A+  HPAV  CAV+  P   WGE   A + LK G+     
Sbjct: 409 RLKDMIISGGENVYSAEVENAINQHPAVAACAVIGIPSDEWGEAVHAALVLKPGQGIRPE 468

Query: 498 EIIAFARERLAGFKTPKKV-VFTELPKTSTGKIQKFELR 535
           E+IA  +  +A +K P+ V V   LP +  GK+ K +LR
Sbjct: 469 ELIAHCKTLIASYKCPRSVAVLDALPLSGAGKVLKTKLR 507