Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  235 bits (599), Expect = 3e-66
 Identities = 169/503 (33%), Positives = 241/503 (47%), Gaps = 19/503 (3%)

Query: 38  AVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGAVL 97
           AVV G  R  +A +  RV+RL + L   G+ PGD V  +  N    VE  FG    G V+
Sbjct: 19  AVVCGDTRLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVI 78

Query: 98  NTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAPLLIEVADDAAGVHA 157
           N +NIR +   VAY L     + +LVD  F P+AAE    L      ++   D A     
Sbjct: 79  NPVNIRWNPKEVAYSLDDCDTRILLVDDVFAPMAAEL-RGLSSSLRTVVYCGDGAVPEGM 137

Query: 158 LGGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTV 217
           +G    YE  LA  DP      P D  E  A+ YT GTTG+PKGV+  H    +  +GTV
Sbjct: 138 VG----YEALLAATDPAED--APHDSDELAAVMYTGGTTGQPKGVMLTHGSLCINALGTV 191

Query: 218 ISW-RMVLYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVSAQAIYTAIAENGVTHF 276
            +  R       +   P+FH  G   +    M    V         A+   +    +T  
Sbjct: 192 AALPRDTQDAAAIVAAPMFHVAGCGVALQSLMRLVPVHVVPVFDELAVLRTLQSARITEM 251

Query: 277 GGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEELGFNVT---QVYGLTE 333
              P ++  ++  P  A    S ++ + + GA P  A L       F  T   QVYG+TE
Sbjct: 252 FLVPTMIKRVIEHPRFAEFDLS-SLRLLSYGAAPIDAALLDQAMRAFPGTAFAQVYGMTE 310

Query: 334 TYGHVTECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPMDGATTGEVM 393
               VT     P     P  +R  +    G  +P  E + ++D +  +VP      GE++
Sbjct: 311 LSPVVTAL---PSHCHAPGPDRERLLRSAGTPIPIAE-LRIVDGDDNEVPF--GQVGEIV 364

Query: 394 MRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQHPDGYIQIADRAKDIIISGGENISSV 453
            RG  VMKGY+  P  T  A  GG+ H+GD      +G++ + DR KD+I+SGGEN+ S 
Sbjct: 365 ARGPMVMKGYWNKPKETEAALRGGWMHTGDGGYMDEEGFVFVVDRMKDMIVSGGENVYSA 424

Query: 454 EVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEAEIIAFARERLAGFKTP 513
           EVE A+   P VL+ AV+  PD  WGE   A +  ++G   E   +IA  RE++AG+K P
Sbjct: 425 EVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHCREQIAGYKCP 484

Query: 514 KKVVFTE-LPKTSTGKIQKFELR 535
           + V F + LP ++ GK+QKF+LR
Sbjct: 485 RSVEFRDALPLSAAGKLQKFQLR 507