Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (EC 6.2.1.44) of DmdB2 type from Variovorax sp. SCN45

 Score =  222 bits (566), Expect = 2e-62
 Identities = 160/509 (31%), Positives = 244/509 (47%), Gaps = 21/509 (4%)

Query: 45  RFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGAVLNTINIRL 104
           R T+    +R  ++A+AL G  +   D VATL  N    +E ++GV   G VL+TIN RL
Sbjct: 39  RTTWGGIASRARQVANALDGEQLLFSDRVATLAWNGYRHLELYYGVSGSGRVLHTINPRL 98

Query: 105 DVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAPLLIEV-----ADDAAGVHALG 159
             D +A+I +H   + +  D  FLPL      R     P++ +      AD       + 
Sbjct: 99  HPDQIAWIANHAEDQILCFDLSFLPLVQAVHAR----CPMIRKWVALCDADKLPADSGVP 154

Query: 160 GYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVIS 219
               YE +L     D+ W    DE  + ++ YTSGTTG PK  +Y HR   L      + 
Sbjct: 155 NLVSYETWLGQQSTDYDW-PTFDENSASSMCYTSGTTGNPKAALYSHRSTMLHAYAAALP 213

Query: 220 --WRMVLYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCR-DVSAQAIYTAIAENGVTHF 276
              R+      L +VP+FH N W   +   ++G  +V     +  +++Y  I   GVT  
Sbjct: 214 DVMRISAQDSVLPVVPMFHVNAWGIPYSAALVGCKLVFPGPSLDGKSVYELIESEGVTFA 273

Query: 277 GGAPIVLNMIVNAPDAARRPFSHTVEVFTAGA--PPAAATLAAIEELGFNVTQVYGLTET 334
            G P V  M++         FS        G+  PPA  T A  E+    V   +G+TE 
Sbjct: 274 AGVPTVWQMMLGHMQTNGLKFSKLNRTVIGGSACPPAMIT-AFQEKYNVEVLHAWGMTEM 332

Query: 335 YGHVTECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPMDGATTGEVMM 394
               T C       +LP   +  I+ +QG A+  ++ + ++D +  ++P DG   G++++
Sbjct: 333 SPLGTLCTLKNKHLSLPADAQLQIRMKQGRAIFGVD-MKIVDGDGNELPWDGKAYGDLLV 391

Query: 395 RGNSVMKGYYRNPDAT---AEAFAGGYFHSGDIALQHPDGYIQIADRAKDIIISGGENIS 451
           +G  V+K Y++        A+A   G+F +GD+A    DGY+QI DR+KD+I SGGE IS
Sbjct: 392 KGPWVVKEYFKGEGGDPLIADAQGRGWFPTGDVATIDADGYLQITDRSKDVIKSGGEWIS 451

Query: 452 SVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEAEIIAFARERLAGFK 511
           S+++E   + HPAV + A +    P W E P   V  K G      E++ F   + A ++
Sbjct: 452 SIDIENIAVAHPAVAMAACIGVFHPKWDERPIIAVVKKPGAEVTREELLKFYEGKTAKWQ 511

Query: 512 TPKKVVFTE-LPKTSTGKIQKFELRNRAK 539
            P  VVF E +P  +TGKI K  LR   K
Sbjct: 512 IPDDVVFVEAIPLGATGKILKTRLRELLK 540