Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  585 bits (1509), Expect = e-171
 Identities = 295/535 (55%), Positives = 369/535 (68%), Gaps = 3/535 (0%)

Query: 9   GLDKCAANYVPLTPLSHLARAALVYPDREAVVYGARRFTYAEYHARVSRLASALAGAGIA 68
           GL   A N+V LTPLS + R A VY +  AV++GA R  + E + R  RLASALAG GI 
Sbjct: 7   GLMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALAGRGIG 66

Query: 69  PGDVVATLLPNIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFL 128
            GD VA +LPN P M+EAHFGVP  GAVLNT+N+RLD + +A++L HG AK ++ D +F 
Sbjct: 67  RGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLITDREFH 126

Query: 129 PLAAEACERLDGPAPLLIEVADDAAGVHALGGYTEYEDFLAGGDPDFPWIMPRDEWESLA 188
            +   A   L+ P PL+++V D   G        +YE  L  GDP+F W  P DEW++++
Sbjct: 127 AVIEGALALLEHP-PLVVDVDDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEWQAIS 185

Query: 189 LNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMVLYPRWLAIVPLFHCNGWNHSWMMPM 248
           LNYTSGTTG PKGVVYHHRGAYL  +G  ++W M   P +L  +P+FHCNGW + W +  
Sbjct: 186 LNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAMGHRPVYLWTLPMFHCNGWCYPWTITA 245

Query: 249 LGGTVVCCRDVSAQAIYTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGA 308
           L GT V  R V  Q I T I E+ V+H  GAPIVLN +VN P+AA+    H V+   AGA
Sbjct: 246 LAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQAMVAGA 305

Query: 309 PPAAATLAAIEELGFNVTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVALPQ 368
            P A  + A+E++G  VT  YGLTE YG VT C W+ +WD L   ERA IK+RQGV  P 
Sbjct: 306 APPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQGVRYPT 365

Query: 369 MEHITVMDPE-MRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQ 427
           ++ + V DP+ ++ VP DG T GE+ MRGN+VMKGY +NP+ATAEAF GG+FH+GD+A+ 
Sbjct: 366 LDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTGDLAVW 425

Query: 428 HPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVE 487
           H DGYI+I DR KDIIISGGENIS++EVE AL  H AVL  AVVA+PD  WGE PCAFV 
Sbjct: 426 HADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETPCAFVA 485

Query: 488 LKDGK-TAEEAEIIAFARERLAGFKTPKKVVFTELPKTSTGKIQKFELRNRAKAL 541
           LK G+    EA+I ++ RE LAGFK PK VVF ELPKTSTGKIQK+ LR+RAKAL
Sbjct: 486 LKPGREDTREADITSWCREHLAGFKVPKTVVFGELPKTSTGKIQKYVLRDRAKAL 540