Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

 Score =  246 bits (629), Expect = 1e-69
 Identities = 168/517 (32%), Positives = 258/517 (49%), Gaps = 24/517 (4%)

Query: 36  REAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGA 95
           RE V     R TY + + R++RLA+ L  AG+  GD VA +  +    +E  F +P  GA
Sbjct: 34  REIVYRDQMRLTYPQLNERIARLANVLTEAGVKAGDTVAVMDWDSHRYLECMFAIPMIGA 93

Query: 96  VLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLD--GPAPLLIEVADDAA 153
           V++TIN+RL  + + Y ++H   + VLV+S F+ L      +L       LL +  D  A
Sbjct: 94  VVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQLTTVDKTLLLTDGPDKTA 153

Query: 154 GVHALGGYTEYEDFLAGGDP--DFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYL 211
            +  L G  EYE  LA   P  DFP     DE       YT+GTTG PKGV + HR   L
Sbjct: 154 ELPGLVG--EYEQLLAAASPRYDFPDF---DENSVATTFYTTGTTGNPKGVYFSHRQLVL 208

Query: 212 MTM------GTVISWRMV-LYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVSAQAI 264
            T+      G++ S R++     ++ I P+FH + W   +   MLG   V         +
Sbjct: 209 HTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAATMLGMKQVYPGRYEPDML 268

Query: 265 YTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEELGFN 324
                E  VT     P +L M++N P+A  + F    ++   G+    +   A    G  
Sbjct: 269 VKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGW-KIIIGGSSLNRSLYQAALARGIQ 327

Query: 325 VTQVYGLTETYGHVTECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPM 384
           +T  YG++ET   ++    N +     + ER   + + GV +P +E   ++D E   +P 
Sbjct: 328 LTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPVPLVE-AAIVDGEGNFLPA 386

Query: 385 DGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQHPDGYIQIADRAKDIII 444
           DG T GE+++R   +  GY++ P+ + E + GG+ H+GD+A     GYI I DR KD+I 
Sbjct: 387 DGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATLDGMGYIDIRDRIKDVIK 446

Query: 445 SGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDG-----KTAEEAEI 499
           +GGE +SS+++E  +  HPAV   AVV   DP WGE P A +  +DG     K  +E   
Sbjct: 447 TGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLVARDGHDIDAKALKEHLK 506

Query: 500 IAFARERLAGFKTPKKV-VFTELPKTSTGKIQKFELR 535
               +  +  +  P ++ + TE+PKTS GK+ K  +R
Sbjct: 507 PFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIR 543