Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 517 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  247 bits (630), Expect = 9e-70
 Identities = 177/515 (34%), Positives = 252/515 (48%), Gaps = 21/515 (4%)

Query: 26  LARAALVYPDREAVVYGARRFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVE 85
           LARA        A ++  R+ T+A+   RV R A+AL   G+ PGD +  L  N    +E
Sbjct: 7   LARAVQTRRQHTATIFAGRQRTWAQVGERVPRAAAALRALGLQPGDRLGILAMNSDNYIE 66

Query: 86  AHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAPLL 145
             F       VL  +N R  V    Y L     +A++VD  F+P   +  + L G A   
Sbjct: 67  IFFAAAWANLVLVPLNTRWAVPENIYTLDDAQCQALIVDDAFVP---QVPQLLAGHAMAH 123

Query: 146 IEVADDAAGVHALGGYTEYEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYH 205
           +  A + A    + GY   E  +AG  P       RD+ E   + YT GTTG PKGV+  
Sbjct: 124 VIHAGEGATPEGMRGY---EALIAGTAP-MADECGRDD-ELCGIYYTGGTTGHPKGVMLS 178

Query: 206 HRGAYLMTMGTVISWRMVLYPRWLAIVPLFHCNGWNHSWMMPMLGGTVVCCRDVSAQAIY 265
           H+     ++  + +        ++    LFH  G + +  + + GGT VC     A   +
Sbjct: 179 HKNFISASVNWIATLHFSEDTVYMHSAGLFHLAGCSPAIALTLAGGTHVCLPKFDAVLAF 238

Query: 266 TAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAP-PAAATLAAIEELG-F 323
            AI  + V +    P ++NM++N P   +   S         +P P     AA+E+L  +
Sbjct: 239 EAIQTHQVNYCLFVPTMVNMMINHPAFPQYDLSSVRYCEYGASPMPVPVLAAAMEKLPTW 298

Query: 324 NVTQVYGLTETYGHVTECVWNPDWDT--LPQAERAAIKARQGVALPQMEHITVMDPEMRQ 381
              Q YG+TE+        W   +D   LP    AA +A  GV       + ++D E  +
Sbjct: 299 EFIQGYGMTESAALTVSLPWRYHFDQPDLPSKRLAAGRAAYGV------DVRIVDEEGNE 352

Query: 382 VPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGDIALQHPDGYIQIADRAKD 441
           VP    T GE+ +RG  VM GY+R P+ATA A   G+ H+GD A    DG++ I DR KD
Sbjct: 353 VPR--GTHGEIAVRGAQVMIGYWRKPEATAAALRNGWLHTGDAAYMDEDGFVYIVDRVKD 410

Query: 442 IIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEAEIIA 501
           +IISGGENI S EVE A+  HPAV  CAV+  P+  WGE   A V LK+G++A   +II 
Sbjct: 411 MIISGGENIYSREVENAVHAHPAVRDCAVIGIPNAEWGESVHAVVVLKEGQSASAKDIID 470

Query: 502 FARERLAGFKTPKKVVFTE-LPKTSTGKIQKFELR 535
             R  +AG+K P+ V F+E LP +  GKI K  LR
Sbjct: 471 HCRTLIAGYKVPRSVDFSEALPLSGAGKIMKNVLR 505