Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 547 a.a., 3-methylmercaptopropionyl-CoA ligase (DmdB) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  236 bits (603), Expect = 1e-66
 Identities = 160/504 (31%), Positives = 248/504 (49%), Gaps = 11/504 (2%)

Query: 45  RFTYAEYHARVSRLASALAGAGIAPGDVVATLLPNIPAMVEAHFGVPACGAVLNTINIRL 104
           R T+ +  +R  ++A+AL G G+  GD VATL  N    +E +FGV   G VL+T+N RL
Sbjct: 39  RSTWGQIASRSRQVANALDGLGLPQGDRVATLAWNGYRHLELYFGVSGTGRVLHTLNPRL 98

Query: 105 DVDTVAYILSHGGAKAVLVDSQFLPLAAEACERLDGPAP-LLIEVADDAAGVHALGGYTE 163
             + + +I++H   KAV  D  FLPL      +       + +  AD       + G   
Sbjct: 99  HPEQLVWIVNHAEDKAVCFDMTFLPLVKAVAAKCPTVKHWIALCDADKLPADSGIPGLQS 158

Query: 164 YEDFLAGGDPDFPWIMPRDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMV 223
           YE ++      + W    DE  + ++ YTSGTTG PK  +Y HR   L   G  +   M 
Sbjct: 159 YEAWMGQQPTTYAW-PTFDENSASSMCYTSGTTGNPKAALYSHRSTLLHAFGAALPDAMC 217

Query: 224 LYPR--WLAIVPLFHCNGWNHSWMMPMLGGTVVCC-RDVSAQAIYTAIAENGVTHFGGAP 280
           L  R   L +VP+FH N W   +    +G  +V     +  +++Y  I    VT   G P
Sbjct: 218 LSARDSVLPVVPMFHVNAWGLPYAAAAVGCKLVFPGAALDGKSVYELIEAEKVTMAAGVP 277

Query: 281 IVLNMIVNAPDAARRPFSHTVEVFTAGAPPAAATLAAIEEL-GFNVTQVYGLTETYGHVT 339
            V  M++    A    FS        G+    A ++A  ++ G  V   +G+TE     T
Sbjct: 278 TVWQMLLGHLQANNLKFSTLNRTVIGGSACPPAMISAFNDVYGVEVLHAWGMTEMSPLGT 337

Query: 340 ECVWNPDWDTLPQAERAAIKARQGVALPQMEHITVMDPEMRQVPMDGATTGEVMMRGNSV 399
            C        LP AE+  ++ +QG A+   + + +++    ++P DG   G++++RG  +
Sbjct: 338 VCTLKNAQLALPPAEQLKVRLKQGRAIFGAD-MKIVNEAGEELPWDGKAYGDLLVRGPWI 396

Query: 400 MKGYYRNPDATA---EAFAGGYFHSGDIALQHPDGYIQIADRAKDIIISGGENISSVEVE 456
           +  Y++         +A   G+F +GD+A    DG++QI DR+KD+I SGGE ISS++VE
Sbjct: 397 IASYFKGEGGDPLRYDAQGHGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDVE 456

Query: 457 GALMHHPAVLLCAVVAKPDPTWGEVPCAFVELKDGKTAEEAEIIAFARERLAGFKTPKKV 516
              M HPAV + A V    P W E P   V  K G      E++AF   ++A ++ P  V
Sbjct: 457 NIAMAHPAVAMAACVGMRHPKWDERPIVVVVKKPGTELSREELLAFYEGKIAKWQIPDDV 516

Query: 517 VFTE-LPKTSTGKIQKFELRNRAK 539
           VF + +P  +TGK+QK  LR + K
Sbjct: 517 VFVDAIPLGATGKMQKMTLREQLK 540