Pairwise Alignments

Query, 541 a.a., AMP-dependent synthetase and ligase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 545 a.a., Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  233 bits (593), Expect = 2e-65
 Identities = 168/533 (31%), Positives = 260/533 (48%), Gaps = 23/533 (4%)

Query: 19  PLTPLSHLARAALVYPDREAVVY----GARRFTYAEYHARVSRLASALAGAGIAPGDVVA 74
           PL   S +  AA  +P  E V         R  +     R  ++A+AL   G+ PG+ V 
Sbjct: 9   PLLISSLIEHAATFHPHTEIVSRLPEGTVHRTDWLGVRQRARQVANALQALGVQPGERVG 68

Query: 75  TLLPNIPAMVEAHFGVPACGAVLNTINIRLDVDTVAYILSHGGAKAVLVDSQFLPLAAEA 134
           TL  N    +  ++GV   GAVL+T+N RL  + + YI++H   K +  D  F PL  + 
Sbjct: 69  TLAWNSYRHLALYYGVSGSGAVLHTVNPRLFPEQIDYIVNHAEDKVLCFDISFAPLVEQL 128

Query: 135 CERLDGPAPLLIEVADDAAGVHALG--GYTEYEDFLAGGDPDFPWIMPRDEWESLALNYT 192
             RL      +     D A + A+       +++ L     D+ W    DE  + +L YT
Sbjct: 129 APRLKSVKAFV--AMTDRAHMPAIQVPNLLCFDELLDAQSSDYTW-PELDEKSASSLCYT 185

Query: 193 SGTTGRPKGVVYHHRGAYLMTMGTVI--SWRMVLYPRWLAIVPLFHCNGWNHSWMMPMLG 250
           SGTTG PKGV+Y HR   L T+  +   ++ +      + IVP+FH N W   +   M+G
Sbjct: 186 SGTTGNPKGVLYSHRSTLLHTLMELAPDTFGISSAETLMLIVPMFHANAWGAPYAAAMVG 245

Query: 251 GTVVCCRD-VSAQAIYTAIAENGVTHFGGAPIVLNMIVNAPDAARRPFSHTVEVFTAGAP 309
             +V     +  +++YT + +  VT   G P V  M+    D   +     + V   G  
Sbjct: 246 ARLVLPGPHLDGESVYTLMRDEKVTFSQGVPTVWMMLFQYLDKNPQIDPRQLGVKRIGIG 305

Query: 310 PAAATLAAIE----ELGFNVTQVYGLTET--YGHVTECVWNPDWDTLPQAERAAIKARQG 363
            AA + A +E    + G  V Q +G+TET   G +++ +  P  + +   E   +K +QG
Sbjct: 306 GAAVSRAVLERFEKQFGAEVVQGWGMTETSPIGVISKLL--PKHEGMAPDELVKVKLKQG 363

Query: 364 VALPQMEHITVMDPEMRQVPMDGATTGEVMMRGNSVMKGYYRNPDATAEAFAGGYFHSGD 423
             +  ++ + ++D + R +P DG   G +M+RG  +  GYYR    +      G+F +GD
Sbjct: 364 RGVWGVD-LKIVDADGRALPWDGVAYGNLMVRGPWIASGYYRGEGGSV-LDEEGFFPTGD 421

Query: 424 IALQHPDGYIQIADRAKDIIISGGENISSVEVEGALMHHPAVLLCAVVAKPDPTWGEVPC 483
           +A    DGY+Q+ DRAKD+I SGGE ISS++VE A   HP V   AV+    P W E P 
Sbjct: 422 VATIDADGYLQLVDRAKDVIKSGGEWISSIDVENAAASHPGVAEAAVIGVAHPKWQERPL 481

Query: 484 AFVELKDGKTAEEAEIIAFARERLAGFKTPKKVVFTE-LPKTSTGKIQKFELR 535
             V  + G   +   ++A    R+A +  P  V+F E LP T+TGK+ K +LR
Sbjct: 482 LLVVKRPGAEVDREAVLAHLATRVAKWWLPDDVLFVESLPHTATGKLLKTKLR 534