Pairwise Alignments

Query, 463 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 469 a.a., nitrogen regulation protein NR(I) from Escherichia coli ECRC98

 Score =  280 bits (717), Expect = 6e-80
 Identities = 170/461 (36%), Positives = 252/461 (54%), Gaps = 17/461 (3%)

Query: 6   ILLIEDTPSLQLVYDAIIRGAGHAVICADTADAGLTGFKTHKPRVVVLDLMLPDRDGLEL 65
           + +++D  S++ V +  + GAG      +     L    +  P V++ D+ +P  DGL L
Sbjct: 6   VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASKTPDVLLSDIRMPGMDGLAL 65

Query: 66  MRECLALNPDARFVVITANGSINRAVEAMRGGAYEFLVKPFDEGRFLAAIDNALRDHVRP 125
           +++    +P    +++TA+  ++ AV A + GA+++L KPFD    +A ++ A+  +   
Sbjct: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQ 125

Query: 126 PEETPEVLND-FRGFIGSSDTMQDVYRRIQSVSRSMATVFITGESGTGKEVCAQAVHDSS 184
            +     LN      IG +  MQDV+R I  +SRS  +V I GESGTGKE+ A A+H  S
Sbjct: 126 QQPRNVQLNGPTTDIIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRHS 185

Query: 185 TRAGKPFVPLNCGAIPSDLLESEVFGHLRGSFTGAIADKIGAAAAADGGTLFLDEICEMD 244
            RA  PF+ LN  AIP DL+ESE+FGH +G+FTGA   + G    ADGGTLFLDEI +M 
Sbjct: 186 PRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDMP 245

Query: 245 LNLQTKLLRFLQTSTIQPVGATRARKINVRIICATNRNPLEEVRRGRFREDLYYRLQVVP 304
           L++QT+LLR L       VG     K++VRII AT++N  + V+ G+FREDL++RL V+ 
Sbjct: 246 LDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIR 305

Query: 305 IHLPPLRERGEDVIAIARDAVRKFAAEEGRRFTGLAPEVEALFRTLPWPGNVRQVINVMR 364
           +HLPPLRER ED+  +AR  ++  A E G     L PE EA    L WPGNVRQ+ N  R
Sbjct: 306 VHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETEAALTRLAWPGNVRQLENTCR 365

Query: 365 NVVVLNDGPLVTQTMLPLEILHHHEAMTNNAGPVGLPPEKPVVSL------------DGL 412
            + V+  G  V    LP E+     A + +     + P+     L              L
Sbjct: 366 WLTVMAAGQEVLIQDLPGELFESTVAESTSQ----MQPDSWATLLAQWADRALRSGHQNL 421

Query: 413 MGRTMAEIERMVIEETIARHGGSVPKAARVLDLSPSTIYRK 453
           +     E+ER ++   +    G   +AAR+L    +T+ RK
Sbjct: 422 LSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRK 462