Pairwise Alignments

Query, 463 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECOR27

 Score =  288 bits (736), Expect = 3e-82
 Identities = 166/448 (37%), Positives = 253/448 (56%), Gaps = 17/448 (3%)

Query: 6   ILLIEDTPSLQLVYDAIIRGAGHAVICADTADAGLTGFKTHKPRVVVLDLMLPDRDGLEL 65
           IL+++D  S   +  A++RG G+ V  A++    L   +     +V+ D+ + + DG+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 66  MRECLALNPDARFVVITANGSINRAVEAMRGGAYEFLVKPFDEGRFLAAIDNALRDHVRP 125
           ++E  ALNP    +++TA  S+  AVEA++ GA ++L+KP D     A ++ AL      
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSI 127

Query: 126 PEETPEVLNDFRGFIGSSDTMQDVYRRIQSVSRSMATVFITGESGTGKEVCAQAVHDSST 185
             ETP V     G +G S  MQ +   I  V+ S ATV I G+SGTGKE+ A+A+H SS 
Sbjct: 128 DAETPAVTASQFGMVGKSSAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASSA 187

Query: 186 RAGKPFVPLNCGAIPSDLLESEVFGHLRGSFTGAIADKIGAAAAADGGTLFLDEICEMDL 245
           R+ KP V LNC A+   LLESE+FGH +G+FTGA   + G    ADGGTLFLDEI ++  
Sbjct: 188 RSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISP 247

Query: 246 NLQTKLLRFLQTSTIQPVGATRARKINVRIICATNRNPLEEVRRGRFREDLYYRLQVVPI 305
            +Q +LLR +Q   +Q VG+ +   ++VR+I AT+R+   EV  GRFR+DLYYRL VV I
Sbjct: 248 MMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVAI 307

Query: 306 HLPPLRERGEDVIAIARDAVRKFAAEEGRRFTGLAPEVEALFRTLPWPGNVRQVINVMRN 365
            +P LR+R ED+  +A   +++FA    +   G  P+   L     WPGN+R++ N +  
Sbjct: 308 EVPSLRQRREDIPLLAGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVER 367

Query: 366 VVVLNDGPLVTQTMLPLEILHHHEAMTNNAGPVGLPPEKPVVSLDGLMGRTMAEIERMVI 425
            VVL  G  +++  LPL I          + P+ L   + +        + + E+E+ VI
Sbjct: 368 AVVLLTGEYISERELPLAIA---------STPIPLGQSQDI--------QPLVEVEKEVI 410

Query: 426 EETIARHGGSVPKAARVLDLSPSTIYRK 453
              + + GG+  +AAR L ++  T+  K
Sbjct: 411 LAALEKTGGNKTEAARQLGITRKTLLAK 438