Pairwise Alignments

Query, 511 a.a., NADH dehydrogenase (quinone) (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 521 a.a., hydrogenase 4 subunit F from Escherichia coli ECRC98

 Score =  152 bits (385), Expect = 2e-41
 Identities = 119/471 (25%), Positives = 220/471 (46%), Gaps = 21/471 (4%)

Query: 7   IVIPMITAVITLLLRKTALAYHVSLLGSVALLGSGLILLRAVLTGGPMAAQMGGWEAPFG 66
           ++ P++ +++    RK     H +      L   G+ LL  +       A   G     G
Sbjct: 6   LLTPLLFSLLCFACRKRG---HSATRTVTVLHSLGITLLLILALWVVQTAADAGEIFAAG 62

Query: 67  ITLFADILSAAMVVIAGIVAVAVIVYS----RFDVTEDEKR----VGFHALSHALLVGVC 118
           + L  D L    + I G++     VYS    R +V   E        ++   H  L  + 
Sbjct: 63  LWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEVEHGELSPVTLCDYYGFFHLFLFTML 122

Query: 119 GAFLTGDIFNLYVWFEVMLIASFGLLVIGGRRDQIDAAVKYVGLNLVATLAFLTGVGILY 178
               + ++  ++   E   ++S  L+ I G+R  ++AA KY+ +  V     L G  ++Y
Sbjct: 123 LVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRSSLEAAWKYIIICTVGVAFGLFGTVLVY 182

Query: 179 G-AAGTLNMADLHLVLAD--RQSE----TAVLASAALLLFAFGAKAAMFPVFAWLPASYH 231
             AA  +  A++ +  ++  +QS     T +L +   +L  FG K  +FP+ AWLP ++ 
Sbjct: 183 ANAASVMPQAEMAIFWSEVLKQSSLLDPTLMLLAFVFVLIGFGTKTGLFPMHAWLPDAHS 242

Query: 232 TPAFATSALFAALLTKVGVYALLRVFTVVYDG-GGGFIQPILLIGAVLTMVIGVLGAAAQ 290
                 SAL +A+L    +  L+R + ++    G  F   +LLI  +L++ +       Q
Sbjct: 243 EAPSPVSALLSAVLLNCALLVLIRYYIIICQAIGSDFPNRLLLIFGMLSVAVAAFFILVQ 302

Query: 291 NDVRRILSFHIISQIGYMVLGLALFTPLAIIGAIFYLFHHIIVKANLFFVAGLIKLKAGS 350
            D++R+L++  +  +G + + L +  PL I  A+ +  +H + K  LF  +G + LK G+
Sbjct: 303 RDIKRLLAYSSVENMGLVAVALGIGGPLGIFAALLHTLNHSLAKTLLFCGSGNVLLKYGT 362

Query: 351 EELDKIGGLLKASPFLAILFLIPALSLAGIPPLSGFWAKFIIVQASLEARDWWVALAALA 410
            +L+ + G+LK  PF A+LF   AL+LAG+PP + F ++F+ V A L      + +  L 
Sbjct: 363 RDLNVVCGMLKIMPFTAVLFGGGALALAGMPPFNIFLSEFMTVTAGLARNHLLIIVLLLL 422

Query: 411 VGLITLFSMTKIWLAAFWKDHPDAAFAKGPVMPRSMTAPIAVLAVMTVIIG 461
           +  + L  + ++  A      P  A  +G  +    T+P+ +L VM + +G
Sbjct: 423 LLTLVLAGLVRM-AARVLMAKPPQAVNRGD-LGWLTTSPMVILLVMMLAMG 471