Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 865 a.a., ATP-dependent chaperone ClpB from Paraburkholderia sabiae LMG 24235

 Score =  934 bits (2413), Expect = 0.0
 Identities = 479/865 (55%), Positives = 642/865 (74%), Gaps = 10/865 (1%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M ++K T + +  L  AQ++A+  ++Q + P HLL AL+  ++G A +L+ARAG     +
Sbjct: 1   MRIDKLTTKFQEALADAQSLAVGHDNQYIEPVHLLAALVAQQDGSARSLLARAGVHVQAL 60

Query: 61  REALAAALDKLPKVSGDGAQTYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTKS 120
           + ALA A+ +LP+V G      + +    +L++A+K A K  D+++  E  L ++A  K 
Sbjct: 61  QTALADAITRLPQVQGTDGNVQIGRDLTGLLNQADKEAQKLNDTYIASEMFLLSVADDKG 120

Query: 121 GAKTALEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKIDPI 180
            A       G+S ++L  AI  +R G    +  AES  +ALKK+  DLTE A  GK+DP+
Sbjct: 121 EAGRLAREHGLSRKSLEAAIVAVRGGAQVHSQDAESQREALKKYTIDLTERARAGKLDPV 180

Query: 181 IGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKLMAL 240
           IGRD+EIRR++Q+L RRTKNNPVLIGEPGVGKTAI EGLA RI+NG+VPE+L+ K++++L
Sbjct: 181 IGRDDEIRRSIQILQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSL 240

Query: 241 DMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASNLLK 300
           DM +L+AGAKYRGEFEERLK+VL+++    G+ I+FIDE+HT+VGAGKA+GAMDA N+LK
Sbjct: 241 DMAALLAGAKYRGEFEERLKAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLK 300

Query: 301 PALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKYELH 360
           PAL+RGELHCVGATTLDEYRKY+EKDAAL RRFQ V+V EP+VE T++ILRG++E+YELH
Sbjct: 301 PALSRGELHCVGATTLDEYRKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELH 360

Query: 361 HGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDREIL 420
           HGV I+D A+VAAA LSHRYITDRFLPDKAIDL+DEAAS+++ME+DSKPEE+D LDR  +
Sbjct: 361 HGVDITDPAIVAAAELSHRYITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRI 420

Query: 421 QKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKEHLD 480
           Q +IE EA++ E D AS++RL  +E+++  L +  +++   W +E+  +  +  LKE ++
Sbjct: 421 QLKIEREAVKKEKDEASQKRLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIE 480

Query: 481 KARAELEIAKREGNLARAGELSYGVIPGLEKQL-----AEAESGEGDV---MVEEAVRPE 532
           K RAE+   +REG L +  EL YG +P LE+QL     AEAE         ++   V  E
Sbjct: 481 KTRAEITRLQREGKLEKVAELQYGKLPQLEQQLKAVTKAEAEEQSNPTRPRLLRTQVGAE 540

Query: 533 QIASVVERWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDE 592
           +IA VV R TGIP S+M++GEREKLL++EE++ +RV+GQ  A++AVA+A+RR+RAGL+D 
Sbjct: 541 EIAEVVSRATGIPVSRMMQGEREKLLQIEEKLHQRVVGQDEAISAVADAIRRSRAGLSDP 600

Query: 593 NRPLGSFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYV 652
           NRP GSFLFLGPTGVGKTEL KA+A FLFD +  ++RIDMSEFMEKH+VARLIGAPPGYV
Sbjct: 601 NRPYGSFLFLGPTGVGKTELCKALAAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYV 660

Query: 653 GYDEGGVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLI 712
           GY+EGG LTEAVRR+PY V+L DE+EKAHPDVFNVLLQVLDDG +TDGQGRTVDFK T+I
Sbjct: 661 GYEEGGYLTEAVRRKPYSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVI 720

Query: 713 VLTSNLGAQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAI 772
           V+TSNLG+Q +  +  G    A K  V + V+ HFRPEFLNR+D+ ++F  L R ++ +I
Sbjct: 721 VMTSNLGSQVIQSMV-GEPQDAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSI 779

Query: 773 VDIQLARLQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMIL 832
             IQL R+ +RL    + L + DAA   +   GYDP+FGARPLKR IQ+ +++ +A++IL
Sbjct: 780 AKIQLERVHERLAKLDMQLVVSDAALELIGKVGYDPLFGARPLKRAIQQEIENPVAKLIL 839

Query: 833 AGDVTDGETIPVSAGPDGLLVGDRV 857
           AG     + IPV    +G LV DRV
Sbjct: 840 AGKFGPKDVIPVEV-DNGKLVFDRV 863