Pairwise Alignments

Query, 871 a.a., ATPase AAA-2 domain protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 863 a.a., ATP-dependent chaperone ClpB from Magnetospirillum magneticum AMB-1

 Score = 1151 bits (2977), Expect = 0.0
 Identities = 590/859 (68%), Positives = 707/859 (82%), Gaps = 5/859 (0%)

Query: 1   MNMEKFTERSRGFLQAAQTIAMRENHQRMVPEHLLKALLDDEEGLAANLIARAGGDAARV 60
           M+ EKFTER +GF+Q+AQT+A+R  HQR+ PEHL + LL D+EGLAANLI  AGGD  R 
Sbjct: 1   MDFEKFTERCKGFIQSAQTLALRSGHQRLTPEHLAQVLLADKEGLAANLIRAAGGDPVRA 60

Query: 61  REALAAALDKLPKVSGDGAQ-TYLDQQTAKVLDEAEKLATKAGDSFVPVERILTALAVTK 119
            + +   L KLPKV G GA   +L  + A++LD+A +LA KAGDSFV  ER+L AL +  
Sbjct: 61  LKGVETELGKLPKVEGPGAGGVHLAPELARLLDQAVQLADKAGDSFVTAERLLLALTLA- 119

Query: 120 SGAKTA--LEAGGVSAQALNGAINDIRKGRTADTASAESGYDALKKFARDLTEAAADGKI 177
           +G  TA  L   GV+ Q LN AI D+RKGR A++ASAE  YDALKK+ARDLT+AA DGK+
Sbjct: 120 TGTSTAKVLAEAGVTPQGLNHAIEDVRKGRKANSASAEDSYDALKKYARDLTQAARDGKL 179

Query: 178 DPIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIINGDVPESLRNKKL 237
           DP+IGRDEEIRR +QVLSRRTKNNPVLIGEPGVGKTAI EGLA+RIINGDVPE+L+NK+L
Sbjct: 180 DPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAIRIINGDVPETLKNKRL 239

Query: 238 MALDMGSLIAGAKYRGEFEERLKSVLSEVTAAAGEIILFIDEMHTLVGAGKADGAMDASN 297
           M LD+G+L+AGAK+RGEFEERLK+VL+EVTAA GE++LFIDEMHTL+GAG A+G+MDASN
Sbjct: 240 MVLDLGALVAGAKFRGEFEERLKAVLTEVTAANGEVVLFIDEMHTLIGAGAAEGSMDASN 299

Query: 298 LLKPALARGELHCVGATTLDEYRKYVEKDAALARRFQPVMVQEPTVEDTVSILRGIKEKY 357
           LLKPALARGELHC+GATTL+EYRK+VEKDAALARRFQPV V EP VEDTVSILRG+KEKY
Sbjct: 300 LLKPALARGELHCIGATTLNEYRKHVEKDAALARRFQPVFVSEPGVEDTVSILRGLKEKY 359

Query: 358 ELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLVDEAASRLRMEVDSKPEELDALDR 417
           ELHHGVRI+D ALV+AATLS+RYITDRFLPDKAIDLVDEAASRLRM++DSKPE LD LDR
Sbjct: 360 ELHHGVRIADGALVSAATLSNRYITDRFLPDKAIDLVDEAASRLRMQIDSKPEALDELDR 419

Query: 418 EILQKQIEAEALRLEDDAASRERLASLEKDLSDLQQRSAEMTAQWQSERDKLASARDLKE 477
            I+Q +IE EALR E DA SR+RL  LE +L+ L++ S +M+ +W++E+ +LA +  +KE
Sbjct: 420 RIVQLKIEREALRKESDAGSRDRLGKLEVELNQLERESFDMSERWRAEKSQLADSTKVKE 479

Query: 478 HLDKARAELEIAKREGNLARAGELSYGVIPGLEKQLAEAESGEGDVMVEEAVRPEQIASV 537
            L++AR EL  A+R  N ARAGEL +GVIP LEK++ E     G  M+ E+V  E IASV
Sbjct: 480 QLEEARIELANAERASNWARAGELKFGVIPDLEKRI-EGGGDSGSRMLTESVTEEHIASV 538

Query: 538 VERWTGIPTSKMLEGEREKLLRMEEEIGRRVIGQKTAVNAVANAVRRARAGLNDENRPLG 597
           V RWTGIP  KML+GER+KLL ME  +  RV+GQ  A+ AV+NAVRRARAGL D NRP+G
Sbjct: 539 VSRWTGIPVEKMLQGERDKLLGMESRLKTRVVGQSEALVAVSNAVRRARAGLQDPNRPIG 598

Query: 598 SFLFLGPTGVGKTELTKAVAEFLFDDDSAMVRIDMSEFMEKHAVARLIGAPPGYVGYDEG 657
           SFLFLGPTGVGKTELTKA+AEF+FDD++AMVR+DMSE+MEKH+VARLIGAPPGYVGY+EG
Sbjct: 599 SFLFLGPTGVGKTELTKALAEFMFDDETAMVRMDMSEYMEKHSVARLIGAPPGYVGYEEG 658

Query: 658 GVLTEAVRRRPYQVVLFDEVEKAHPDVFNVLLQVLDDGVLTDGQGRTVDFKQTLIVLTSN 717
           G LTEAVRRRPYQV+LFDEVEKAHPDVFNVLLQVLDDG LTDGQGRTVDF+ TLIVLTSN
Sbjct: 659 GALTEAVRRRPYQVILFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVLTSN 718

Query: 718 LGAQALSQLPDGADASAAKRDVMDAVRAHFRPEFLNRLDETIIFDRLVRDDMDAIVDIQL 777
           LG++ L+   +G D++  + +VM+ VRA FRPEFLNRLDE ++F RL R DM  IVDIQL
Sbjct: 719 LGSEILANQEEGHDSAEVRAEVMEVVRASFRPEFLNRLDEILLFHRLGRGDMSGIVDIQL 778

Query: 778 ARLQKRLDARKLTLALDDAARSWLADEGYDPVFGARPLKRVIQRALQDQLAEMILAGDVT 837
            RL+  L  RK+TL+LD  A  WLA++GYDP +GARPLKRVIQRALQ+ LA +IL G V 
Sbjct: 779 KRLRALLADRKITLSLDAGAMEWLAEKGYDPAYGARPLKRVIQRALQNPLAGLILEGVVK 838

Query: 838 DGETIPVSAGPDGLLVGDR 856
           DG+ + V+AG  GLL+  R
Sbjct: 839 DGDAVTVAAGEGGLLMNGR 857