Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 504 a.a., Glycine betaine transporter OpuD from Variovorax sp. SCN45

 Score =  225 bits (574), Expect = 3e-63
 Identities = 146/480 (30%), Positives = 242/480 (50%), Gaps = 17/480 (3%)

Query: 22  VTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLYWQVLLLATFLIGLVLCFLP-GS 80
           V+ G IA    + L     L ++  T+ +   + FG ++  ++L   ++   L F   G 
Sbjct: 5   VSAGLIAAVVLWGLLSPASLDSVFSTALSGITRNFGWFYLWVVLGLVVLAFFLAFSRFGD 64

Query: 81  RTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIAHFLSTPPVFGDLSGDVQAQA 140
             L      PEF   +W AM+    +  G VFW   EPI+H+ + PP  G ++G   A A
Sbjct: 65  LKLGEEDDEPEFSLGAWFAMLFAAGMGIGLVFWGVAEPISHYANPPP--GVVAGTPDA-A 121

Query: 141 HAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGLPL-APRTLLYPLLGDRALSGPIGL 199
             A+  +F HWG   WAI G +   +       K L L +  T   P    R LS    +
Sbjct: 122 GVAMRYAFFHWGLHPWAIYGIVGLSIAFFTFRRKTLALVSSATEALPWRFVRRLSPAFNV 181

Query: 200 IADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFATQAIAILALVGLYTVSAITG 259
           +A    ++A   G    +G    Q++ GL+   G      TQA  I+    L+  SA++G
Sbjct: 182 LA----VVATAFGVAASLGMGATQINSGLHAAFGTAIGRGTQAAIIVVTTVLFVTSAVSG 237

Query: 260 LAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFFGGMQVYATHFFDMAMYRGDAGLF 319
           + +G+K LS  N++LA +L + +LV GPT+ I   F   +  Y   F  M++       F
Sbjct: 238 VERGVKWLSMGNLVLAALLALVVLVLGPTVAIVETFTNTLGAYIAEFVRMSLRMNP---F 294

Query: 320 GDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSIRQIIITLSIAAPLITNFWFTIIG 379
            ++ W+G WT+F+W W++ + P + +FIAR+SRGR+IRQ I+   IA  L+   WF++ G
Sbjct: 295 RNSSWVGDWTLFYWAWWLAWSPFVGLFIARVSRGRTIRQFILGTVIAPTLVGFAWFSVFG 354

Query: 380 GSGIFFEIAEPGVVSGPFEGFNLPAGLLAITQAMPMGLILSVLFLVLTMCFVATTSDSMS 439
           G+ + F+I + GV        ++   +  + +AMPMG +LS++  +L   F  T+ DS +
Sbjct: 355 GAALNFQIFQ-GVPLVEAVKADVSTTMFVMFKAMPMGALLSMVATLLVFVFFVTSGDSAT 413

Query: 440 YVISSTMTDGEPSTAMRA--FWGLAMGVMALILISTGEGGIGKLQSFIVVTAVPVSLILL 497
            V+ +  T G P+   R    WG+ +  +AL L+    GG+  +Q+  +V A+P + ++L
Sbjct: 414 LVLGTMSTGGNPNPPARVKITWGVLVAAIALSLLFA--GGLKAIQTATIVFALPFAFVIL 471