Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 677 a.a., choline transporter from Pectobacterium carotovorum WPP14

 Score =  207 bits (527), Expect = 1e-57
 Identities = 147/514 (28%), Positives = 245/514 (47%), Gaps = 54/514 (10%)

Query: 19  LFAVTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLYWQVLLLATFLIGLVLCFLP 78
           +F  + G I  F    +   +  +A +  +  + +  FG  W  LL AT  I  V+    
Sbjct: 17  VFYTSAGLILTFSLMTMLFNQEANAWITHALNWVSATFG--WYYLLAATLYIVFVIFIAS 74

Query: 79  ---GSRTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIAHFLSTPPVFGDLSGD 135
              GS  L    S PEF   SWAAM+    +    +F++  EPI  ++  P    +  G 
Sbjct: 75  SRFGSIKLGPEQSKPEFSLMSWAAMLFAAGIGIDLMFFSVAEPITQYMMPP----EGQGQ 130

Query: 136 VQAQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGLPLAPRTLLYPLLGDRALSG 195
               A  A+  +  H+G   W++  +L  + L ++ Y   LPL  R+ LYP+ G R ++G
Sbjct: 131 TIEAARQAMVWTLFHYGLTGWSMY-ALMGIALGYFSYRYNLPLTIRSALYPIFGKR-ING 188

Query: 196 PIGLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFATQAIAILALVGLYTVS 255
           PIG   D + ++  + G    +G   +Q++YGL  L  IP+    QA  IL  V + TVS
Sbjct: 189 PIGHSVDIAAVLGTIFGIATTLGIGVVQLNYGLKVLFQIPENLTVQASLILLSVIMATVS 248

Query: 256 AITGLAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFFGGMQVYATHFFDMAMYRGD 315
             +G+ +GI+ LS++NVLLA+ L++F+L  G T  +       +  Y   F  M +    
Sbjct: 249 VTSGVNRGIRFLSELNVLLALGLILFLLFWGDTEFLLNALVLNVGDYINRFTGMTL--NS 306

Query: 316 AGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSIRQIIITLSIAAPLITNFWF 375
                   W+  WT+FFW W++ + P + +F+ARISRGR+IRQ ++   I   + T  W 
Sbjct: 307 FAFDRPTEWMNSWTLFFWAWWVAWAPFVGLFLARISRGRTIRQFVVGTLIIPFVFTLLWL 366

Query: 376 TIIGGSGIF-------------FEIAEPGVVS--GPFEGFNLPAGLLAITQAMPMGLILS 420
           +I G S ++              +  E G  S    + GF+L A +  IT     GL+  
Sbjct: 367 SIFGNSALYQVLHGNLDFANEVMQHPERGFYSLLAQYPGFSLSASVATIT-----GLL-- 419

Query: 421 VLFLVLTMCFVATTSDSMSYVISSTMT-----DGEPSTAMRAFWGLAMGVMALILISTGE 475
                    F  T++DS S V+ +  +     + +    +R FW +A+G++ L ++ T  
Sbjct: 420 ---------FYVTSADSGSLVLGNFTSRLGDINNDAPNWLRIFWSVAIGLLTLGMLMT-- 468

Query: 476 GGIGKLQSFIVVTAVPVSLI---LLPSLWDALRI 506
            G+  LQ+  V+  +P S +   ++  L+ +LR+
Sbjct: 469 NGVSALQNTTVIMGLPFSFVMFFIMAGLYKSLRV 502