Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 504 a.a., L-carnitine/gamma-butyrobetaine antiporter from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  170 bits (431), Expect = 1e-46
 Identities = 126/507 (24%), Positives = 236/507 (46%), Gaps = 33/507 (6%)

Query: 1   MSDTTRTPGLAPKGADKALFAVTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLYW 60
           M +  R  G+ PK     L  V      + C   + D++  + +++  F++    +G  +
Sbjct: 1   MKNEKRKTGIEPKVFFPPLIIV-----GILCWLTVRDLDAANVVINAVFSYVTNVWGWAF 55

Query: 61  QVLLLATFLIGLVLCFLPGSRTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIA 120
           +  ++        L F P ++  +G    PEF T SW  M+  +  +   +FW + E I 
Sbjct: 56  EWYMVVMLFGWFWLVFGPYAKKRLGN-EPPEFSTASWIFMMFASCTSAAVLFWGSIE-IY 113

Query: 121 HFLSTPPVFGDLSGDVQAQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGLPLAP 180
           +++STPP FG L  +        LA S  HWG L WA    L+      +   K   + P
Sbjct: 114 YYISTPP-FG-LEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRP 171

Query: 181 RTLLYPLLGDRALSGPIGLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFAT 240
            + L PL+G++   G  G I D   ++A++      +G     ++  +  L GIP T   
Sbjct: 172 SSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQL 231

Query: 241 QAIAILALVGLYTVSAITGLAKGIKILSQINVLLAVVLLIFMLV---AGPTMNIFAGFFG 297
            AI I   + L  +    GL KG++I S +   L+ ++L ++ +   A   MN F    G
Sbjct: 232 DAIIITCWIILNAICVACGLQKGVRIASDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVG 291

Query: 298 GMQVYATHFFDMAMYRGDAGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSIR 357
            + +Y      M  Y          G+   WTVF+W W++ Y   M++F+ARISRGR++R
Sbjct: 292 MLLMYLPR---MLFYTDP---IAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVR 345

Query: 358 QIIITLSIAAPLITNFWFTIIGGSGIFFEIAEPGVVSGP--FEGFNLPAGLLAITQAMPM 415
           ++   + +     T   +T++G + +   + +  +++ P   E + +   ++    A+P+
Sbjct: 346 ELCFGMVLGLTASTWILWTVLGSNTLL--LIDKNIINIPNLIEQYGVARAIIETWAALPL 403

Query: 416 GLILSVLFLVLTMCFVATTS--DSMSYVISST----MTDG-EPSTAMRAFWGLAMGVMAL 468
                  F +L  CF+AT +  ++ SY ++ +    + DG EP   +R  W + +G++ +
Sbjct: 404 STATMWGFFIL--CFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGI 461

Query: 469 ILISTGEGGIGKLQSFIVVTAVPVSLI 495
           +L++   GG+  +Q+ I+    P+  +
Sbjct: 462 VLLAL--GGLKPIQTAIIAGGCPLFFV 486