Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 677 a.a., High-affinity choline transport protein from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  215 bits (548), Expect = 4e-60
 Identities = 141/499 (28%), Positives = 245/499 (49%), Gaps = 24/499 (4%)

Query: 19  LFAVTGGFIALFCAYALFDIEGLSALVDTSFAFSAKYFGLYWQVLLLATFLIGLVLCFLP 78
           +F  + G I LF    +   +  +  +  +  + +K FG  W  LL AT  I  V+C   
Sbjct: 17  VFYTSAGLILLFSLTTILFRDFSALWIGRTLDWVSKTFG--WYYLLAATLYIVFVVCIAC 74

Query: 79  ---GSRTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAGEPIAHFLSTPPVFGDLSGD 135
              GS  L    S PEF   SWAAM+    +    +F++  EP+  ++  P    + +G 
Sbjct: 75  SRFGSVKLGPEQSKPEFSLLSWAAMLFAAGIGIDLMFFSVAEPVTQYMQPP----EGAGQ 130

Query: 136 VQAQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGLPLAPRTLLYPLLGDRALSG 195
               A  A+  +  H+G   W++  +L  + L ++ Y   LPL  R+ LYP+ G R ++G
Sbjct: 131 TIEAARQAMVWTLFHYGLTGWSMY-ALMGMALGYFSYRYNLPLTIRSALYPIFGKR-ING 188

Query: 196 PIGLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPDTFATQAIAILALVGLYTVS 255
           PIG   D + +I  + G    +G   +Q++YGL+ L  IPD+ A +A  I   V + T+S
Sbjct: 189 PIGHSVDIAAVIGTIFGIATTLGIGVVQLNYGLSVLFDIPDSMAAKAALIALSVIIATIS 248

Query: 256 AITGLAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFFGGMQVYATHFFDMAMYRGD 315
             +G+ KGI++LS++NV LA+ L++F+L  G T  +       +  Y   F  M M    
Sbjct: 249 VTSGVDKGIRVLSELNVALALGLILFVLFMGDTSFLLNALVLNVGDYVNRF--MGMTLNS 306

Query: 316 AGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISRGRSIRQIIITLSIAAPLITNFWF 375
                   W+  WT+FFW W++ + P + +F+ARISRGR+IRQ ++   I     T  W 
Sbjct: 307 FAFDRPVEWMNNWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVLGTLIIPFTFTLLWL 366

Query: 376 TIIGGSGIFFEIAEPGVVSGPFEGFNLPAGLLAITQAMPMGLILSVLFLVLTMCFVATTS 435
           ++ G S + +EI   G         +   G  ++    P     + +  +  + F  T++
Sbjct: 367 SVFGNSAL-YEIIHGGAAFAEEAMVHPERGFYSLLAQYPAFTFSASVATITGLLFYVTSA 425

Query: 436 DSMSYVISSTMT-----DGEPSTAMRAFWGLAMGVMALILISTGEGGIGKLQSFIVVTAV 490
           DS + V+ +  +     + +    +R FW +A+G++ L ++ T   GI  LQ+  V+  +
Sbjct: 426 DSGALVLGNFTSQLKDINSDAPGWLRVFWSVAIGLLTLGMLMT--NGISALQNTTVIMGL 483

Query: 491 PVSLIL---LPSLWDALRI 506
           P S ++   +  L+ +L++
Sbjct: 484 PFSFVIFFVMAGLYKSLKV 502