Pairwise Alignments

Query, 519 a.a., BCCT transporter (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 665 a.a., choline transporter from Escherichia coli ECOR38

 Score =  252 bits (644), Expect = 3e-71
 Identities = 159/515 (30%), Positives = 268/515 (52%), Gaps = 26/515 (5%)

Query: 1   MSDTTRTPGLAPKGADKALFAVTGGFIALFCAYALF--DI--EGLSALVDTSFAFSAKYF 56
           MS+    P  +    +KA+F  +   I L  A+A    D+  +    L    F  ++ ++
Sbjct: 1   MSENDTIPKKSTSQINKAVFFTSALLIFLLVAFAAVFPDVADKNFKLLQQQIFTNASWFY 60

Query: 57  GLYWQVLLLATFLIGLVLCFLPGSRTLMGGLSTPEFGTFSWAAMIMCTLLAGGGVFWAAG 116
            L   ++LL+   +GL      G   L    + P+F   SW AM+    +  G +F+   
Sbjct: 61  ILAVALILLSVTFLGLSRY---GDIKLGPDHAQPDFSYHSWFAMLFSAGMGIGLMFFGVA 117

Query: 117 EPIAHFLSTPPVFGDLSGDVQAQAHAALAQSFLHWGFLAWAILGSLTTVMLMHYHYDKGL 176
           EP+ H+LS PPV    + +  A A  A+  +F HWG  AWAI  ++  ++L  + Y  GL
Sbjct: 118 EPVMHYLS-PPVG---TPETVAAAKEAMRLTFFHWGLHAWAIY-AIVALILAFFSYRHGL 172

Query: 177 PLAPRTLLYPLLGDRALSGPIGLIADASCIIAVVAGTVGPIGFLGLQMSYGLNDLTGIPD 236
           PL  R+ LYP++GDR + GP+G   D   +I  V G    +G+  LQ++ GLN L G+P 
Sbjct: 173 PLTLRSALYPIIGDR-IYGPVGHAVDIFAVIGTVFGVATSLGYGVLQVNAGLNHLFGVPI 231

Query: 237 TFATQAIAILALVGLYTVSAITGLAKGIKILSQINVLLAVVLLIFMLVAGPTMNIFAGFF 296
               Q I I+ + GL T+S ++GL KGI+ILS++N+ LA++LL  +L  GPT+ +   F 
Sbjct: 232 NETVQVILIVVITGLATISVVSGLDKGIRILSELNLGLALLLLALVLCLGPTVLLLKSFV 291

Query: 297 ----GGMQVYATHFFDMAMYRGDAGLFGDAGWLGWWTVFFWGWFMGYGPLMAVFIARISR 352
               G +    +  F++  Y   +     + WLG WT+ +WGW++ + P + +FIAR+SR
Sbjct: 292 ENTGGYLSELVSKTFNLYAYEPKS-----SNWLGGWTLLYWGWWLSWSPFVGMFIARVSR 346

Query: 353 GRSIRQIIITLSIAAPLITNFWFTIIGGSGIFFEIAEPGVVSGPFEGFNLPAGLLAITQA 412
           GR+IR+ +  +       T  W T+ G S I+  + +           ++   L    + 
Sbjct: 347 GRTIREFVTGVLFVPAGFTLMWMTVFGNSAIYLIMNQGATDLANTVQQDVALALFNFLEH 406

Query: 413 MPMGLILSVLFLVLTMCFVATTSDSMSYVISSTMTDGEPSTAM--RAFWGLAMGVMALIL 470
            P   +LS + + + + F  T++DS + V+ +  + G  +T +  R FW   MG++A+ L
Sbjct: 407 FPFSSVLSFIAMAMVIVFFVTSADSGAMVVDTLASGGVANTPVWQRIFWASLMGIVAIAL 466

Query: 471 ISTGEGGIGKLQSFIVVTAVPVSLILLPSLWDALR 505
           +    GG+  LQ+  + +A+P S+ILL S++  L+
Sbjct: 467 LLA--GGLSALQTVTIASALPFSVILLISIYGLLK 499