Pairwise Alignments

Query, 323 a.a., transcriptional regulator, DeoR family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 320 a.a., sugar-binding transcriptional regulator from Pectobacterium carotovorum WPP14

 Score =  113 bits (282), Expect = 7e-30
 Identities = 82/302 (27%), Positives = 143/302 (47%), Gaps = 8/302 (2%)

Query: 13  EEQLLVRLAWACEFEGMTQAAAAKRFNVTRLRVNRALSEARRRGILRVNIDSVFAAAAEL 72
           E +LL  +A A   + +TQ   AK+F ++R++V R L  A+  GI+ + +      +  L
Sbjct: 9   ESELLTEIAVAYYQDEITQEEIAKKFGISRIKVGRLLKRAKEEGIVEITVRYHPVFSTRL 68

Query: 73  EWNLERRFRLKQAVVVPSPQDARSVTQLVSAGLGGLLGELLRDKEITHFGMSWGNTLNMA 132
           E  +  RF +K+A++    QD     + V+A +   L   L+D  +   G   G  +   
Sbjct: 69  EQQMLERFSIKRALIALDHQDEEEQRRQVAALVSNYLALSLKDDTVVAVGQ--GRNVAAV 126

Query: 133 TRHMQPLDRPDLEIVSIMGGVSR-GSDVNGYEITTRLADLCNAEHSFFTAPLYAGSAESR 191
             H+  +   +   +  +GG  R G  +N   I+ RLA           +P Y  +   +
Sbjct: 127 ADHVSNVTERNCRFICGIGGTHRPGDAINADHISRRLAKKFGGSSETLYSPAYVENRALK 186

Query: 192 TLFVEQDVIRDMLEKIRSCQAIALATGDL-ESSLLVQDA--LPSGITADELRALGGVGDI 248
             F++   I++ L++ R      +  GD+ E+S +V+     P  I    L   G +GDI
Sbjct: 187 EAFMQNGTIKETLDRARKADIALVGIGDMNENSYMVKLGWFTPHEIIDASLNQ-GVIGDI 245

Query: 249 TGH-ILDAKGELIDHPLNQRVIGMSLDDMAKIDNVILAAGGLHKVAVINAALTRGFVDTL 307
            G+   +A+G+ +D  +N+RVIG+S++++ KI  VI  A    K   I  AL  G +D +
Sbjct: 246 AGYDFFNAQGQHVDTVMNERVIGVSIEELHKIPCVIAIASENTKALAILGALRTGAIDII 305

Query: 308 VT 309
            T
Sbjct: 306 AT 307