Pairwise Alignments

Query, 323 a.a., transcriptional regulator, DeoR family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  119 bits (297), Expect = 1e-31
 Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 10/305 (3%)

Query: 19  RLAWACEFEGMTQAAAAKRFNVTRLRVNRALSEARRRGILRVNIDSVFAAAAELEWNLER 78
           R  W     G TQ   A   +++R    R +S A    +++V +D   AA  E    L+ 
Sbjct: 16  RAGWLYYVAGRTQDEIAAAMSISRQSAQRLVSLAVAERLIKVRLDHPIAACLEKAERLKE 75

Query: 79  RFRLKQAVVVPS-PQDARSVTQLVSAGLGGLLGELLRDKEITHFGMSWGNTLNMATRHMQ 137
           +F LK   VVPS P    S   +  AG    +   L++ +     +  G TL  A   + 
Sbjct: 76  KFDLKYIEVVPSDPAGVSSTVGIAEAG-AAEIERWLKNADPIVLAIGTGRTLKAAVDQLP 134

Query: 138 PLDRPDLEIVSIMGGVSRGSDVNGYEITTRLADLCNAEHSFFTAPLYAGSAESRTLFVEQ 197
           P++ P   IVS+ G +        Y +   +AD   A H     P+   SAE R L  +Q
Sbjct: 135 PMECPQHRIVSLTGNIGPDGSAAYYNVIFSMADAIKARHFPMPLPVLCSSAEERELLHDQ 194

Query: 198 DVIRDMLEKIRSCQAIALATGDL-ESSLLVQDALPSGITADELRAL---GGVGDITGHIL 253
            ++R  L    +     +  G+L E++ L  D     +  DE++AL   G VG+I G + 
Sbjct: 195 SMVRSTLALGAAANVTFVGVGELGENAPLCVDGF---LGVDEMKALMASGAVGEICGWMY 251

Query: 254 DAKGELIDHPLNQRVIGMSLDDMAKIDNVILAAGGLHKVAVINAALTRGFVDTLVTDEYT 313
           DA G +++H +N+RV  + +        VI  A G  K A I AAL  G ++ L+TDE T
Sbjct: 252 DANGHILEHSVNERVASVPIPSRDTC-TVIGMAQGARKNASILAALKGGLLNGLITDEAT 310

Query: 314 AVALL 318
           +  LL
Sbjct: 311 SEYLL 315