Pairwise Alignments

Query, 447 a.a., ABC transporter for Xylitol, periplasmic substrate-binding component (from data) from Dinoroseobacter shibae DFL-12

Subject, 410 a.a., sugar ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 84/375 (22%), Positives = 159/375 (42%), Gaps = 31/375 (8%)

Query: 67  GIKVNVIKHPYENALGEQVRDFVAGGDLDVALIDLVWIGSFAENEWILPLADVQAKFPDA 126
           GIK+   +  +++ + E +R +  G   D+  ID      FA     L + D+ AK    
Sbjct: 56  GIKIEYRQLQFDDVVSESMRAYSTGNAPDIIAIDNPNHAMFASRGAFLDVTDMIAK---- 111

Query: 127 VDPDLDIDDFFPLVLNAFGGWNDTIYGLPFDNYSGLMFYNRCMLEEAGFDG--PPSTWEE 184
               +  +++FP  L +   W+   +G+P    +  ++YN+ + + AG D   PP TW+E
Sbjct: 112 -SDVIKTENYFPGPLKSVT-WDGKYFGVPKATNTIALYYNKDLFKAAGLDAAKPPQTWDE 169

Query: 185 LKDVYGPALTKDGK--YAFALQSKRNETQSADSFARMLWPFGGSFLNEEFRSNLMSEGSQ 242
           L D     LT   K  Y  +  +K NE +    F       G ++       N+ ++G+ 
Sbjct: 170 LVDA-ARKLTNPAKNVYGISFSAKANE-EGTFQFLPWAQMAGATY------KNINTDGAV 221

Query: 243 AGLKFRQELME---YMPDGIVAYDHAETVNAFSQGDVAMITEWSAFYSSVVSPETSRVAD 299
             L+  + L++     PD +       T   F+ G+ AM          ++  + ++   
Sbjct: 222 KALETWKTLLDEKLASPDTLTRSQWDSTA-TFNAGNAAMAISGPWEIDRML--KDAKFDW 278

Query: 300 CVEIAPEPMGPAGRKPALGGFSLAVASQADEAEQAAAYLFIQWATSKANAREYLERGGVP 359
            V + P P   A R  A+G ++ A+ S+      A A+  I++  SK +   +   G +P
Sbjct: 279 GVTLLPVPTPDAPRSSAMGDYNWAIFSKT--KHPAEAFKAIEFFASK-DKDMFKNFGQLP 335

Query: 360 ARQSVYQQDGLEEFK--FVPALVESWQDGVPEFRPRFAEWPEITEIVQEWGTKMMLGEVT 417
           AR  +         K   +   VE  +   P  R    EWP+I++ +Q+     + G++T
Sbjct: 336 ARSDIPVPPTGNALKDEALKTFVEQLKYAQP--RGPSPEWPKISKAIQDAIQGALSGQMT 393

Query: 418 TEEGAQEIGTRMEEV 432
            +    +   +++ V
Sbjct: 394 PKAALDQAAEKIKLV 408