Pairwise Alignments

Query, 498 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 504 a.a., Galactofuranose ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  297 bits (760), Expect = 7e-85
 Identities = 174/480 (36%), Positives = 271/480 (56%), Gaps = 11/480 (2%)

Query: 1   MNGLQKSFGKNNVLRGIDLTLDPGSVTVLMGANGAGKSTLVKVICGQHRADGGTMRLATN 60
           + G+ K FG   VLR + L L  G +  LMG NGAGKSTL+KV+ G   + GG M L   
Sbjct: 10  LKGIHKQFGGIPVLRDVQLRLYAGEIHALMGQNGAGKSTLIKVLTGVLPSSGGEMLLDGQ 69

Query: 61  AFDPEDAADAIRQGVVTVHQSIDDGVIPDLDVANNLMLDRLAEH--SHGLFVRERHLRTE 118
              P    +A + G+ TV+Q ++  + P+L VA N+   R      + G  +    +   
Sbjct: 70  PIRPASPLEAQKLGISTVYQEVN--LCPNLSVAENVFAGRYPRCGVAQGFRIDWAGVNRR 127

Query: 119 AAKVAAAMGIEVNLRARVSDLSVADRQMIAIARAMARAPKVLILDEPTSSLSATEADRLF 178
           A ++ A +G+++++   +S  SVA +QM+AIARA+  + KVLILDEPTSSL   E ++LF
Sbjct: 128 AEELLARIGLDIDVTRLLSSYSVAVQQMVAIARALGVSSKVLILDEPTSSLDDDEVEKLF 187

Query: 179 ELIDRLRAQGVAILYISHRMSDIRRIADRIVVMRDGMISGVFETEPLDLEAAVTAMLGHR 238
           E++ RLR +G+AI++++H ++ +  ++DRI V+R+G   G ++   L  +A + AMLG  
Sbjct: 188 EVLRRLRGEGLAIVFVTHFLNQMYAVSDRITVLRNGGWIGEWKAAELGPQALIAAMLGRE 247

Query: 239 MTEVDAEVR------QGTHPVLEIKNLQLFEGASPITLTAHDGEVVALVGLLGSGKSRLA 292
           +    A         +    +L+ + L          L    GEVV + GLLG+G++ LA
Sbjct: 248 LAAQSARPAALPAFDEAAPALLQAEGLGQAGQLQATDLRVRAGEVVGIAGLLGAGRTELA 307

Query: 293 EILFGIARPIRGSIRIKGKDYSPRSVKDAIAQGVFMSPKDRGTNAVIPAFDIADNMTLPF 352
            +LFG+  P RG +++ G+  S  +  DAI +G+ + P++R T+ ++    + +N+ L  
Sbjct: 308 RLLFGLETPDRGVLKVDGRSVSFSNPADAIREGLALCPEERKTDGIVSELSVRENIALAL 367

Query: 353 LQGMSVGSFLKSRQQRGTAQGMVDRLGIVCQSVRDGIGTLSGGNQQKVMIARWLLEPAQV 412
              +    FL   +Q   AQ  V  LGI   SV   IG LSGGNQQK MIARWL    +V
Sbjct: 368 QARLGTKRFLSHAEQTEMAQRFVKSLGIKTASVETPIGLLSGGNQQKAMIARWLATEPRV 427

Query: 413 LLLDEPFQGVDIGARRDIGHHI-RATTQGRATLVFLAEIDEALEIADRIVVMSEGAIVGE 471
           L+LDEP +G+D+ A+++I   I R    G A +   +E+ E + +A RIVV+ +   VGE
Sbjct: 428 LILDEPTRGIDVAAKQEIMEEILRLAKAGMAVIFISSEMSEVVRVAHRIVVLRDRKKVGE 487



 Score = 67.8 bits (164), Expect = 9e-16
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 11/254 (4%)

Query: 252 PVLEIKNLQLFEGASPIT----LTAHDGEVVALVGLLGSGKSRLAEILFGIARPIRGSIR 307
           PVL +K +    G  P+     L  + GE+ AL+G  G+GKS L ++L G+     G + 
Sbjct: 6   PVLALKGIHKQFGGIPVLRDVQLRLYAGEIHALMGQNGAGKSTLIKVLTGVLPSSGGEML 65

Query: 308 IKGKDYSPRSVKDAIAQGVFMSPKDRGTNAVIPAFDIADNMTLPFLQ--GMSVGSFLKSR 365
           + G+   P S  +A   G+    ++     + P   +A+N+        G++ G  +   
Sbjct: 66  LDGQPIRPASPLEAQKLGISTVYQEVN---LCPNLSVAENVFAGRYPRCGVAQGFRIDWA 122

Query: 366 QQRGTAQGMVDRLGIVCQSVRDGIGTLSGGNQQKVMIARWLLEPAQVLLLDEPFQGVDIG 425
                A+ ++ R+G+     R  + + S   QQ V IAR L   ++VL+LDEP   +D  
Sbjct: 123 GVNRRAEELLARIGLDIDVTRL-LSSYSVAVQQMVAIARALGVSSKVLILDEPTSSLDDD 181

Query: 426 ARRDIGHHIRATTQGRATLVFLAE-IDEALEIADRIVVMSEGAIVGEHTNRNIDLAALVA 484
               +   +R        +VF+   +++   ++DRI V+  G  +GE     +   AL+A
Sbjct: 182 EVEKLFEVLRRLRGEGLAIVFVTHFLNQMYAVSDRITVLRNGGWIGEWKAAELGPQALIA 241

Query: 485 DISGATSTVTGTSP 498
            + G         P
Sbjct: 242 AMLGRELAAQSARP 255