Pairwise Alignments

Query, 249 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 248 a.a., Aliphatic sulfonates import ATP-binding protein SsuB from Xanthobacter sp. DMC5

 Score =  141 bits (355), Expect = 1e-38
 Identities = 86/212 (40%), Positives = 116/212 (54%), Gaps = 15/212 (7%)

Query: 1   MTTLQLSGIGHAFLGRT-----VLDTIDLSVAQGEIVALVGPSGCGKSTLAHIAAGLIEA 55
           ++ +QL  +G +F+ R      VL  IDL V +  IVALVG SGCGKSTL +I AGLI  
Sbjct: 1   VSVVQLESVGKSFMRRDGEQLEVLRNIDLDVPERSIVALVGASGCGKSTLLNIVAGLIPP 60

Query: 56  RAGRIS---------HGYTRHAMIFQDPALIPWATAAGNIDYVLRMARVPRAARPTRIAQ 106
             G +            +     +FQ+  L PW T A NI   L  A  PRA R  R+ Q
Sbjct: 61  DQGTVYLNGQKSSAFRDWRSMTYMFQEDRLFPWRTTAQNIALGLEAAGTPRAERRDRVMQ 120

Query: 107 AAAQVALLAEDLNKYPVELSGGMRQRVAIARALAIRPDFIYFDEPFTALDVALRRRMQDL 166
               V L  +  + +P ELSGGMR R A+ R+L   P  +  DEPF+ LD ++R +M D 
Sbjct: 121 VLELVGL-EKFADSFPHELSGGMRSRAALGRSLVTEPSILLMDEPFSKLDPSIRTQMHDE 179

Query: 167 VIATCAGGHLSGLFITHDLSEAARIAHRIAVL 198
           V+   A   +S LF+THD+ EA  +A++I VL
Sbjct: 180 VLRIAALRQMSVLFVTHDVEEAVVLANKIVVL 211