Pairwise Alignments

Query, 249 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 540 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  133 bits (334), Expect = 9e-36
 Identities = 90/204 (44%), Positives = 118/204 (57%), Gaps = 18/204 (8%)

Query: 16  RTVLDTIDLSVAQGEIVALVGPSGCGKSTLAHIAAGLIEARAGRI----------SHGYT 65
           +  L  IDL +A GE+VALVG SG GK+TL    AGL++   GRI          S G+ 
Sbjct: 298 KRALKGIDLRIAPGEVVALVGGSGSGKTTLGRAIAGLLQPSGGRILFEGKGIARRSEGWA 357

Query: 66  RHA----MIFQDPA--LIPWATAAGNIDYVLR-MARVPRAARPTRIAQAAAQVALLAEDL 118
           R+     M+FQDPA  L P  T   +I   L  M  +  AAR  RI +   +V+L AE  
Sbjct: 358 RYRAQCQMVFQDPASSLDPRMTVGASIGEALTGMPGLTPAARRGRILEVLQEVSLPAEVA 417

Query: 119 NKYPVELSGGMRQRVAIARALAIRPDFIYFDEPFTALDVALRRRMQDLVIATCAGGHLSG 178
           ++YP ELSGG RQRVAIARA+  RP FI  DEP +ALDV +R ++ +L     +    S 
Sbjct: 418 SRYPHELSGGQRQRVAIARAVVRRPAFIVADEPVSALDVTVRAQILELFAQLQSRHGFSC 477

Query: 179 LFITHDLSEAARIAHRIAVLDTHG 202
           LFI+HDL+   +IA R+ V+  HG
Sbjct: 478 LFISHDLAVVEQIADRVIVM-RHG 500



 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 76/232 (32%), Positives = 113/232 (48%), Gaps = 27/232 (11%)

Query: 4   LQLSGIGHAFL-GRTVLDTIDLSVAQGEIVALVGPSGCGKSTLAHIAAGL----IEARAG 58
           LQ+SG+  A   G+ ++  I   +A GE++ +VG SG GK+  A    GL    +   AG
Sbjct: 10  LQVSGLTLALADGKALVHGISFDIAPGEMIGIVGESGSGKTLAARSLIGLAPPAVHRTAG 69

Query: 59  RI----------SHGYTRH------AMIFQDP--ALIPWATAAGNIDYVLRM-ARVPRAA 99
            I          S G  R        M+FQ+P  +L P       +D  L +   +  A 
Sbjct: 70  SIVFDGQEVTALSAGALRKLRGSRIGMVFQEPMTSLNPSMAIGRQLDEGLALHTTLSPAQ 129

Query: 100 RPTRIAQAAAQVALL--AEDLNKYPVELSGGMRQRVAIARALAIRPDFIYFDEPFTALDV 157
           R  RI +   +V +   A  L+ YP   SGGMRQR+ +A A+ +RP  +  DEP TALD 
Sbjct: 130 RRARILEMLERVRIQDPAAALSAYPHRFSGGMRQRIMLASAMLLRPSLLIADEPTTALDA 189

Query: 158 ALRRRMQDLVIATCAGGHLSGLFITHDLSEAARIAHRIAVLDTHGRGILGHR 209
            ++R + DL++        + L I+HDL   AR   R+ V+  HGR +  +R
Sbjct: 190 VVQREVMDLMVELTRDHGTAVLMISHDLPMVARYTDRMVVMH-HGRIVESNR 240