Pairwise Alignments

Query, 323 a.a., 40-residue YVTN family beta-propeller repeat protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 340 a.a., conserved hypothetical protein containing WD40/YVTN repeat domain from Pseudomonas putida KT2440

 Score = 95.1 bits (235), Expect = 2e-24
 Identities = 75/316 (23%), Positives = 133/316 (42%), Gaps = 29/316 (9%)

Query: 21  GRAFVSNERGNTITVVNTDTWEVETEFFAGNRPRGITVSPDEKVIYVCA----------- 69
           G  + +NER  +I+ VN  T +V T       P  + VSPD  ++ V             
Sbjct: 29  GNVYTANERSASISQVNLATGDVSTVALP-IAPHNLQVSPDGSLLLVVGVAGHAGHSSGE 87

Query: 70  SDDNLIRVFDATTYEELP-SLPSGPDPELFILEPSGKRLYIANEDDNLVTVTDTETRMVL 128
                + VF  +  +  P S P+G  P   I + +G R ++ +   N V + D E R+ L
Sbjct: 88  KPGGQLLVFSTSALDRPPFSFPAGDHPAHVITDVTGLRAFVTDSAANRVRIFDLEQRIEL 147

Query: 129 AEVPVGVEPEGMGMSPDAKWVVNTSETTNMAHFISTEDYKIKHNILVDQRPRYAHYTSDG 188
             +P G  P G+ +SPD + +   +  ++    I     K    I V + P    +  DG
Sbjct: 148 PGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLKETAQIPVGKGPVQVGFAPDG 207

Query: 189 TRLFVTSEIGGTVSVMDIDEDGAPTVVGKISFEVAGLQPEWLQPVGARVTKDGSRLFVA- 247
              FV+      + ++D        V+GK+             P+    T DG +++VA 
Sbjct: 208 RLAFVSLSATNQLGIIDT---ARRKVIGKVDVGRT--------PIQMMATVDGRQVYVAN 256

Query: 248 ----LGPANRVAVVDARSLEVLDYILVGQRVWQLDFTPDEKYLLTTNGNSNDITVIDVEK 303
                 P +RV++VD ++   L  +  G+    +  + D  Y+  +N  +  ++VID   
Sbjct: 257 QGSGQNPDDRVSIVDIQTRSSLGTVTTGKGAHGVAISSDGAYVFVSNIEAGTVSVIDTSS 316

Query: 304 ERAIRSIQVGQQPWGV 319
            + + + +VG  P G+
Sbjct: 317 RKVVATHKVGAGPNGI 332



 Score = 90.1 bits (222), Expect = 7e-23
 Identities = 77/274 (28%), Positives = 122/274 (44%), Gaps = 23/274 (8%)

Query: 18  GLAGRAFVSN--ERGNTITVVNTDTWEVET-EFFAGNRPRGITVSPDEKVIYVCASDDNL 74
           G+AG A  S+  + G  + V +T   +     F AG+ P  +         +V  S  N 
Sbjct: 76  GVAGHAGHSSGEKPGGQLLVFSTSALDRPPFSFPAGDHPAHVITDVTGLRAFVTDSAANR 135

Query: 75  IRVFDATTYEELPSLPSGPDPELFILEPSGKRLYIANEDDNLVTVTDTETRMVLAEVPVG 134
           +R+FD     ELP +P+G  P    L P G+ LYIAN   + V++ D  T    A++PVG
Sbjct: 136 VRIFDLEQRIELPGIPTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLKETAQIPVG 195

Query: 135 VEPEGMGMSPDAKWVVNTSETTNMAHFISTEDYKIKHNILVDQRPRYAHYTSDGTRLFVT 194
             P  +G +PD +    +   TN    I T   K+   + V + P     T DG +++V 
Sbjct: 196 KGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRTPIQMMATVDGRQVYVA 255

Query: 195 SEIGG-----TVSVMDIDEDGA--PTVVGKISFEVAGLQPEWLQPVGARVTKDGSRLFVA 247
           ++  G      VS++DI    +      GK +  VA             ++ DG+ +FV+
Sbjct: 256 NQGSGQNPDDRVSIVDIQTRSSLGTVTTGKGAHGVA-------------ISSDGAYVFVS 302

Query: 248 LGPANRVAVVDARSLEVLDYILVGQRVWQLDFTP 281
              A  V+V+D  S +V+    VG     + F P
Sbjct: 303 NIEAGTVSVIDTSSRKVVATHKVGAGPNGISFEP 336



 Score = 61.6 bits (148), Expect = 3e-14
 Identities = 54/232 (23%), Positives = 101/232 (43%), Gaps = 25/232 (10%)

Query: 97  LFILEPSGKRLYIANEDDNLVTVTDTETRMVLAEVPVGVEPEGMGMSPDAKWVVNTSETT 156
           L +  P+G  +Y ANE    ++  +  T  V + V + + P  + +SPD   ++      
Sbjct: 22  LVMANPTGN-VYTANERSASISQVNLATGDV-STVALPIAPHNLQVSPDGSLLLVVGVAG 79

Query: 157 NMAHFISTE---DYKIKHNILVDQRP-------RYAHYTSD--GTRLFVTSEIGGTVSVM 204
           +  H    +      +     +D+ P         AH  +D  G R FVT      V + 
Sbjct: 80  HAGHSSGEKPGGQLLVFSTSALDRPPFSFPAGDHPAHVITDVTGLRAFVTDSAANRVRIF 139

Query: 205 DIDEDGAPTVVGKISFEVAGLQPEWLQPVGARVTKDGSRLFVALGPANRVAVVDARSLEV 264
           D+++            E+ G+ P    P G R++ DG  L++A   ++ V+++D  +L+ 
Sbjct: 140 DLEQ----------RIELPGI-PTGRYPHGLRLSPDGRTLYIANMKSDSVSLIDVVTLKE 188

Query: 265 LDYILVGQRVWQLDFTPDEKYLLTTNGNSNDITVIDVEKERAIRSIQVGQQP 316
              I VG+   Q+ F PD +    +   +N + +ID  + + I  + VG+ P
Sbjct: 189 TAQIPVGKGPVQVGFAPDGRLAFVSLSATNQLGIIDTARRKVIGKVDVGRTP 240