Pairwise Alignments

Query, 758 a.a., histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  249 bits (636), Expect = 3e-70
 Identities = 158/426 (37%), Positives = 239/426 (56%), Gaps = 11/426 (2%)

Query: 307 GFLVELKDVTLETQTTELL-------ENRVAARTAELTRANARLTAEYEQKARVEEELRL 359
           G  V ++D+T    T + L       E RV  RTAELT  N +L  E E++++ E  LR 
Sbjct: 197 GIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQLLREIEERSQAESRLRE 256

Query: 360 SKERAEAAVSSKTRFLAAASHDLLQPINAAKLLISTLQEATRETSFQPMVKRLKGAFSSA 419
           +K  AE A  SKT+FLAA SHDLLQP+NAA+L  S L E     +   +V+ +  +    
Sbjct: 257 AKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQNAAHLVRNVSNSLEDV 316

Query: 420 ENLLHSLLDISRLESADPEAVSLMAVDLGALMESVRDDQSPLAARKGVRLTVVPCSLFVR 479
           ENLL +L+DIS+L++   +A  +    L  LM+++  +   +A  +G+ L  V CS  VR
Sbjct: 317 ENLLGTLVDISKLDAGVIKA-DVAPFALHELMDNLAAEYVQVARSEGLELHFVGCSAVVR 375

Query: 480 SDPVYLMRSIQNLVVNAVQYTEPGGRVLVGGRRKGGHVVLEVWDTGVGIAKKDQARIFEE 539
           SD   L R ++NL+ NA++YT P GRV++G RR  G V +EVWD+G+GIA++    +F E
Sbjct: 376 SDIQLLARILRNLLSNAIRYT-PSGRVVLGCRRLRGGVRIEVWDSGIGIAEEHLQDMFLE 434

Query: 540 FTRGD--DVQLGSGVGLGLSIVDRACRLLGHELSVRSKPGCGSVFRMKIALVDGVPIRRK 597
           F RGD        G+GLGL+IV++   +LGH + VRS  G GSVF +++ L    P  + 
Sbjct: 435 FKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQP 494

Query: 598 TQSAAADDGGQPIDHIVMVIENDEDVLYGTTQWLEQWGASVLAARSTEEALAHVNDMGIP 657
           +Q        +     V V++ND  +  G    LE WG  V+ A S E+    V++    
Sbjct: 495 SQVICEPMLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALSEEDLARQVDNYHAD 554

Query: 658 PDIILADYQLDGPDTGISAISAIRSLTGSDVPAIMITADRSDLVRRLGIENDLTVMTKPA 717
            D+++ADY LD    G+ A++ I +     +PA+MIT + S+ +++   E   T+M KP 
Sbjct: 555 ADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLMHKPV 614

Query: 718 ALSRLR 723
              +L+
Sbjct: 615 RPMKLK 620



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 19/64 (29%), Positives = 27/64 (42%)

Query: 13 QIEKQARIIDALVRRANRQSDISPSAYRSFQSAIDLQRQVAAQSLELETVRTERERTRKT 72
          Q  K  RI DAL+ R           Y +FQ ++ L  QV  ++  L     E +   + 
Sbjct: 22 QNHKLQRINDALIERIESGVTRGNDPYAAFQHSVVLAEQVRERTDALNQAMAELKAVNRL 81

Query: 73 LVEA 76
          L EA
Sbjct: 82 LSEA 85