Pairwise Alignments

Query, 273 a.a., Integrase catalytic region (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 275 a.a., IS426 transposase from Agrobacterium fabrum C58

 Score = 86.7 bits (213), Expect = 5e-22
 Identities = 66/238 (27%), Positives = 109/238 (45%), Gaps = 16/238 (6%)

Query: 35  DTELRVRMKELASERRRFGYRRLHMLLKREGWE-----VNWKKLYRLYRDEGLTVRKRGG 89
           D EL   ++ L  +R  +GYRR+  LL RE        VN K+++R+  +  + + K   
Sbjct: 34  DAELLPAIRRLVDQRPTYGYRRIAALLNRERRAADQPVVNAKRVHRIMGNHAMLLEKHTA 93

Query: 90  -RKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFSRECLA--AVVDTS 146
            RK  +     M +    N RW  D +  A  +G   R+  +ID F RE +A  AV +  
Sbjct: 94  VRKGRLHDGKVMVMRS--NLRWCSDGLEFACWNGEVIRLAFIIDAFDREIIAWTAVANAG 151

Query: 147 ISGARVARELDRIAELRGYPCLV------VSDNGTELTSNAMLKWQEDRKVDWHYIAPGK 200
           ISG+ V   +    E R +          +SDNG+  T+     + +   +   +     
Sbjct: 152 ISGSDVRDMMLEAVEKRFHATRAPHAIEHLSDNGSAYTARDTRLFAQALNLTPCFTPVAS 211

Query: 201 PMQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDDYNHHRPHSSLDGLTPREY 258
           P  NG+ E+F   ++ + +     P  + A R+I  W +DYN   PHS+L   +PR++
Sbjct: 212 PQSNGMSEAFVKTLKRDYIRISALPDAQTALRLIDGWIEDYNEIHPHSALKMASPRQF 269