Pairwise Alignments

Query, 318 a.a., ATPase associated with various cellular activities AAA_3 (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 300 a.a., Carbon monoxide oxidation accessory protein CoxD from Variovorax sp. SCN45

 Score = 53.9 bits (128), Expect = 5e-12
 Identities = 59/210 (28%), Positives = 93/210 (44%), Gaps = 39/210 (18%)

Query: 19  LAAGLVGHERLIESLLVALLADGHLLIEGAPGLAKTRAVKWLADAVDGSFARIQCTPDL- 77
           + AG     RL  ++ +AL     LL+EG PG+ KT   K L+ A+     R+QC   L 
Sbjct: 14  MQAGYFADRRLATAVFLALKLQRPLLLEGEPGVGKTELAKALSKALSRELLRLQCYDGLE 73

Query: 78  -----------------MPSDVTG------TPVYKP----QDGAFEFVRGPVFNNLVLVD 110
                              ++ TG        VY+P    +    + ++ P+   ++L+D
Sbjct: 74  QREALYEWNYAAQLLHMRAAEATGAARDVEAEVYQPHYLIRRPLLQALQTPLPGAVLLID 133

Query: 111 EINRAPPKVQSALLEAMAEHQVT-AGVETYRLPEPFLVVATQNPIEHDGTFPLPEAQLDR 169
           E++RA    ++ LLE + E+QV+   + T R   P + + T N      T  L +A   R
Sbjct: 134 EVDRADEPFEAFLLEYLGEYQVSIPELGTVRAVVPPVTILTSN-----RTRELNDAVKRR 188

Query: 170 FLLHTVLELPGIETERRILELVEAET-QAG 198
            L H  L+ P  E E   L +V A+  QAG
Sbjct: 189 CLYHW-LDYPERERE---LAIVRAQVPQAG 214