Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 225 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  112 bits (280), Expect = 6e-30
 Identities = 78/223 (34%), Positives = 115/223 (51%), Gaps = 7/223 (3%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           +LL+VED+  +   L   L   G+  EA   A+ AL +     +  AI+D+ L    G++
Sbjct: 2   KLLVVEDEALLRHHLFTRLTDSGHVVEAVANAEEALYQTGQFNHDLAIIDLGLPGMGGLD 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           L+R  R    T PIL+L+A    +D+  GLAAGADDYVVKPF F+EL AR+     R+  
Sbjct: 62  LIRQLRTQAKTFPILILTARGNWQDKVEGLAAGADDYVVKPFQFEELEARMNALLRRSSG 121

Query: 124 QRVS-----PARLIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATLWAA 178
              S     P  L    ++  +    + LT  E+ +L  L+R  +    + +L   L+  
Sbjct: 122 FTQSTIVAGPLLLDLNRKQASLDEQPLALTAYEYRILEYLMRHHQQVVAKDRLMEQLYPD 181

Query: 179 EGASTENVVDVYVGYLRRKLETADFGFE-IKTVRNRGFCISGR 220
           +     NV++V VG LRRKLE    GF+ I TVR  G+  + R
Sbjct: 182 DDERDPNVIEVLVGRLRRKLE-GPAGFKPIDTVRGLGYLFNER 223