Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 227 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  118 bits (296), Expect = 8e-32
 Identities = 74/223 (33%), Positives = 111/223 (49%), Gaps = 7/223 (3%)

Query: 3   SRLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGV 62
           +R+L +EDD      +V  L+ HG + +  +     L R  +G Y    +D ML    G+
Sbjct: 2   TRILTIEDDAVTAREIVAELSSHGLDVDWVDNGREGLVRAVSGDYDLITLDRMLPELDGL 61

Query: 63  ELVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHR-- 120
            +V T R  G + PILM+SALS V++R  GL AG DDY+ KPF  DE+ AR+ V   R  
Sbjct: 62  AIVTTLRTIGVSTPILMISALSDVDERVRGLRAGGDDYLTKPFASDEMAARVEVLLRRKS 121

Query: 121 -----ALAQRVSPARLIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATL 175
                  A RV+   L   SR        ++L   E+ LL  L+R+      R  +   +
Sbjct: 122 TVQEFETALRVADLELNLISREASRADQPLSLLPTEYKLLEFLMRNTGQILSRMMIFEEV 181

Query: 176 WAAEGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGFCIS 218
           W        N++DV++G LR+K++       I+TVR  G+ I+
Sbjct: 182 WGYHFDPGTNLIDVHIGRLRKKIDPPGLTPLIRTVRGSGYVIA 224