Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  129 bits (323), Expect = 6e-35
 Identities = 77/217 (35%), Positives = 116/217 (53%), Gaps = 5/217 (2%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           R+L++EDD +    L RGL   G+  +  + A+          Y   ++D ML    G+ 
Sbjct: 2   RILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGLT 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           L R  R  G   P+LML+A   + DR TGL  GADDY+ KPF FDEL+AR+R    R+  
Sbjct: 62  LCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLRRSEI 121

Query: 124 QR-----VSPARLIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATLWAA 178
            R     ++   L   S+R+  G   + LT +EF +L +L+R   +   RS+L   +W  
Sbjct: 122 MRPMVLTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQVWKD 181

Query: 179 EGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGF 215
           +  + +N++DV++G LRRK++       I TVR RGF
Sbjct: 182 DLIAIDNLIDVHIGNLRRKVDAPPAPPLIHTVRGRGF 218