Pairwise Alignments

Query, 227 a.a., two component transcriptional regulator, winged helix family (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 225 a.a., transcriptional activator protein from Pseudomonas putida KT2440

 Score =  118 bits (295), Expect = 1e-31
 Identities = 73/218 (33%), Positives = 113/218 (51%), Gaps = 6/218 (2%)

Query: 4   RLLIVEDDPEITSALVRGLALHGYEAEAENRADRALSRLTAGIYSGAIVDVMLGSDSGVE 63
           +LL+ ED+P+  + L +GLA  G+  +       AL    +  Y   I+DVM+    G E
Sbjct: 2   KLLVAEDEPKTGAYLQQGLAEAGFTVDRVLTGTDALQHALSESYDLLILDVMMPGLEGWE 61

Query: 64  LVRTARAHGATLPILMLSALSGVEDRATGLAAGADDYVVKPFHFDELVARLRVQEHRALA 123
           ++R  RA G  +P+L L+A  GV+DR  GL  GADDY++KPF F EL+AR+R    R  +
Sbjct: 62  VLRMVRAAGKDVPVLFLTARDGVDDRVKGLELGADDYLIKPFAFSELLARVRTLLRRGTS 121

Query: 124 ------QRVSPARLIRTSRRLEMGPDSVTLTEREFDLLALLIRSGEDPQPRSQLHATLWA 177
                  +++   +    RR       + LT +EF LL LL+R   +  P+S + + +W 
Sbjct: 122 TAAQTTMKMADLEVDLLKRRATRSGKRIDLTAKEFSLLELLMRRRGEVLPKSLIASQVWD 181

Query: 178 AEGASTENVVDVYVGYLRRKLETADFGFEIKTVRNRGF 215
               S  NV++V +  LR K++       I T R  G+
Sbjct: 182 MNFDSDTNVIEVAIRRLRAKIDDDFAPKLIHTARGMGY 219