Pairwise Alignments

Query, 536 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 469 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  115 bits (287), Expect = 5e-30
 Identities = 103/372 (27%), Positives = 171/372 (45%), Gaps = 66/372 (17%)

Query: 170 LLGQAINTERLFRSEILSGIEALRIQLAWMALGIALAAGLSVAAFYFGLVRPQFYRLDAV 229
           L+G+ +     FR+ + +   AL + LA M+ G  L         +FG+ R    R+D +
Sbjct: 147 LIGRDLGEPTKFRALVRN---ALMVALAIMSGGALL--------IWFGIGRNALKRIDRM 195

Query: 230 RSAADQIGRGDFSGVLPVSRL-DEIGQLSQQTNRMAAALSDRQAKVDAEWTQLNEIIATR 288
            +A  +I  GD S  LP  R  DE  +LS   N M                         
Sbjct: 196 SAATKRIIAGDLSQRLPQGRSGDEFDRLSGSLNAMLG----------------------- 232

Query: 289 TKELKQANARLEKTDEDRRRFFADVSHELRTPLTVILMEAQIGRQSIPAAAD-------- 340
                    R+EK +E  R+   +++H+L+TPLT +       R    AA D        
Sbjct: 233 ---------RIEKLNEGLRQVSDNIAHDLKTPLTRL-------RNKAAAALDDNDETKRR 276

Query: 341 -AFATIEARAERLNRKIDDLLRLARSETGQLALACVPVALDALVASAIEEVQAELDNAGM 399
            A   I A +++L R  + LL ++R E G +A     V + A+ A + E  +   ++AG+
Sbjct: 277 AALEGIIAESDQLIRTFNALLMISRVEAGSIAAEMTDVDMSAIAADSAELYEPVAEDAGL 336

Query: 400 TLDLVPFRETQVRADPDWLRQVLVSLVRNAIRHARSGE---KLRIAPVVQRTQAGVSITD 456
            L+        V+ + + + Q L +L+ NA+++A  GE   KL +  V +     +S+ D
Sbjct: 337 ALESQIEPGLSVQGNRELIGQALSNLIDNAMKYACEGEGDKKLVVRLVKEPEAIVLSVAD 396

Query: 457 NGPGIPASRQYQVFERFSQGAGATSAQGFGIGLALARWVIDAHGGEISLQSPLPRSDALG 516
           +GPGIPA ++ +V +RF +   + S  G G+GL+L   V++ HGG + L      + A  
Sbjct: 397 HGPGIPADKRGEVLKRFVRLDESRSKPGTGLGLSLVEAVMELHGGSLVLSDTDATNTAC- 455

Query: 517 EHPGLRITILLP 528
             PGL I+++ P
Sbjct: 456 --PGLTISMVFP 465