Pairwise Alignments

Query, 509 a.a., ATP synthase F1, alpha subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

 Score =  160 bits (404), Expect = 1e-43
 Identities = 128/444 (28%), Positives = 205/444 (46%), Gaps = 13/444 (2%)

Query: 9   PSTADLIDAVLDAPPPRPEVSEVGRVAELGDGIAIVTGLAR--ALADEVLD-FASGVS-G 64
           P  A L         P   V+  G V  +  G   V+GL+R   L + V    A+G+  G
Sbjct: 20  PKLAQLASLAGHYADPEFSVAHGGHVRTIAAGHYTVSGLSRHVRLGEFVAHRSATGIHLG 79

Query: 65  IVFDLEPGRLGVVLLGPSQNVAMGEDVRRTGRVVSVPVGPATLGRVVDALGRPRDERDPV 124
            V  +EP    V  + P + + + + V R G    V    +  GR ++ALG P D + P+
Sbjct: 80  EVVRVEPDICYVCPIEPGEPIGIHDTVIRKG-AFRVSPDESWCGRTINALGEPIDGQGPL 138

Query: 125 TDSPLA-PVEAEAPDILSRTPVSRPLATGLKAVDAAVPVGLGQRQLIIGDRQTGKTSIAV 183
               +   +   AP  ++R  V  P  TG++A+D   P+ LGQR  I      GK+++  
Sbjct: 139 ASGIVRRSISNNAPPSMTRKRVETPFKTGVRAIDIFSPLCLGQRLGIFAGSGVGKSTLL- 197

Query: 184 DTILNQKDTGVICIYCAIGQRGDAVAKVIGALQGGEMLGQTVVIAAGDEDAPGLAYIAPY 243
            ++L + D     +   +G+RG  V + I    G  M     V+A  DE +P L  +AP 
Sbjct: 198 -SMLAKADAFDKVVIALVGERGREVREFIEDTMGDNMSKSVAVVATSDE-SPMLRKMAPL 255

Query: 244 AAMSVAESFAAQGRDVLVVLDDLTHHARTYRELSLLLRRPPGREAFPGDIFYVHARLLER 303
           +A+++AE F  QG +VL+++D +T  A   RE+++    PP    +P  +F    RLLER
Sbjct: 256 SAVTIAEHFRDQGDNVLLIIDSVTRFAHAIREVAVASGEPPVARGYPASVFTELPRLLER 315

Query: 304 AGQFGEGAGSITALPVVETQAENLSAYIPTNLISITDGQIYLSPKLVRTNQFPAVDLGVS 363
           AG   EG G+ITA+  +    +N +  I  +   I DG I L   L    ++P ++   S
Sbjct: 316 AGPGAEGTGTITAIVSILVDGDNHNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLAS 375

Query: 364 VSRVGGKAQARAFRAVGGNLRVTLSQFEELEEFARFG---TRLDEDTRARLARGGAVRNA 420
           +SR+  KA       +   L+  + +FEE  +    G      D D    + +   +   
Sbjct: 376 ISRLAKKAWTPDQEKLVSRLKALVHRFEETRDLRLIGGYRPGTDPDLDMAVKQVPIIYET 435

Query: 421 LRQAERDPMAAHEQLAVLVAAMEG 444
           L+Q   +P AA +  A L  A+ G
Sbjct: 436 LKQLPDEP-AAQDAYADLATALRG 458