Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 349 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  324 bits (831), Expect = 2e-93
 Identities = 163/326 (50%), Positives = 222/326 (68%), Gaps = 7/326 (2%)

Query: 32  VLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYAC 91
           +LA+A  ++P   NDYW +A+++PFL+ ++A +GLN+LTGY GQ S+G  GFMAVGA+A 
Sbjct: 26  LLALAFIVVPLWGNDYWLNAILIPFLVLSLAGLGLNLLTGYTGQTSVGAAGFMAVGAFAT 85

Query: 92  YKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNKV 151
           Y  +   P+L + + +L GG+I+A VG+LFGLPS RIKGFYL V TLAAQFFL WLF K 
Sbjct: 86  YGFLLRLPELGLPVALLGGGIISALVGLLFGLPSSRIKGFYLMVTTLAAQFFLEWLFVKF 145

Query: 152 PWFYNYSASGQINAPERTMFGYAITGPNADAAPKYLFCLAFLFVLAWLARNLTRGTIGRS 211
           PWFYNY +SG I+AP+  +FG+ +  P      +YL  L  + +L W A NL R  +GR+
Sbjct: 146 PWFYNYGSSGTISAPKLALFGHDLNTP----LGRYLLTLVTVLLLTWTAINLVRSQVGRN 201

Query: 212 WMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGALFFSVYLGAVEVGEAFGINQSF 271
           WMAIRDMD AA ++G+  ++ K  AFAVSSF++G+AGAL+   YLG      +F IN+SF
Sbjct: 202 WMAIRDMDTAAAVVGIPVVRYKRLAFAVSSFYLGIAGALWAFAYLGTAS-ASSFDINRSF 260

Query: 272 LVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGSLGW--DTAIAAHFEFVVLGGLI 329
            +LF+IIIGG+GSI G+  GAAFI LLP+ L +      G   D     + + ++ G LI
Sbjct: 261 QILFIIIIGGMGSIAGNFVGAAFISLLPIFLSHAGQALFGGSVDAGQLQNLQKIIFGVLI 320

Query: 330 IFFLIVEPHGLARLWQLAKEKLRLWP 355
           I FLI EP GL RL    ++++R WP
Sbjct: 321 IVFLIKEPEGLIRLLHNLRDRVRQWP 346