Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 354 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  418 bits (1075), Expect = e-121
 Identities = 215/360 (59%), Positives = 263/360 (73%), Gaps = 8/360 (2%)

Query: 1   MFYREAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWA 60
           MFYRE G FK+SY AD Q FPIA DR+   ++L VA  ++P  ++DYW  A++ PFLI +
Sbjct: 1   MFYRENGQFKSSYRADQQIFPIAQDRIAILVLLLVAFVVVPLGVSDYWMRAILTPFLILS 60

Query: 61  IAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVL 120
           +AA+GLNIL GYCGQ+SLGTG FMAVGAYA Y        + +   +LLGG+ +  +GVL
Sbjct: 61  LAALGLNILVGYCGQISLGTGAFMAVGAYAAYNFQVRIDGMPLIASLLLGGLCSTVIGVL 120

Query: 121 FGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNA 180
           FG+PSLRIKG YLAVATLAAQFF  W F ++ WF N S+SG ++     +FG  I  P  
Sbjct: 121 FGIPSLRIKGLYLAVATLAAQFFTDWAFLRIQWFTNNSSSGSVSVAGLNVFGVPIESP-- 178

Query: 181 DAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVS 240
               KYLFCLAF+ V A LA+NL R  IGR WMA+RDMD+AA +IG+ P+ AKLTAFAVS
Sbjct: 179 --VQKYLFCLAFVVVFALLAKNLVRSAIGREWMAMRDMDVAAAVIGIRPVYAKLTAFAVS 236

Query: 241 SFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPV 300
           SF VGVAGAL+  V+LGA E   AF I++SF +LFM+IIGGLGSI GS  GAAFIVLLP+
Sbjct: 237 SFIVGVAGALWGFVHLGAWEPA-AFSIDRSFQLLFMVIIGGLGSIMGSFFGAAFIVLLPL 295

Query: 301 LLKNVMVGSLGW--DTAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWPFPH 358
            L N +   LG+   TA+A+H E ++ G LI+FFLIVEPHGLARLW  AKEKLRLWPFPH
Sbjct: 296 FL-NQLPAWLGFSISTALASHLETMIFGALIVFFLIVEPHGLARLWSTAKEKLRLWPFPH 354