Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 354 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  318 bits (815), Expect = 1e-91
 Identities = 162/327 (49%), Positives = 225/327 (68%), Gaps = 7/327 (2%)

Query: 31  LVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90
           L+L VA   +P++ NDYW +A+++PFL+ ++A +GLN+LTGY GQ S+G  GFMAVGA+A
Sbjct: 30  LLLLVAFVGLPWLGNDYWLNAILIPFLVLSLAGLGLNVLTGYTGQTSVGAAGFMAVGAFA 89

Query: 91  CYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLAAQFFLVWLFNK 150
            Y L+   P L + + ++ GG+I   VG+LFG+PS RIKGFYL V TLAAQFFL W+F K
Sbjct: 90  TYGLLLRVPGLPLPLALIGGGLIAGLVGLLFGIPSSRIKGFYLMVTTLAAQFFLEWVFAK 149

Query: 151 VPWFYNYSASGQINAPERTMFGYAITGPNADAAPKYLFCLAFLFVLAWLARNLTRGTIGR 210
            PWFYN+++SG I+AP   +F +++  P      +YL  L+ + +L W+A NL R  +GR
Sbjct: 150 FPWFYNHASSGTISAPRLELFSHSLASP----VGRYLLTLSCVVLLTWVAVNLVRSQVGR 205

Query: 211 SWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGALFFSVYLGAVEVGEAFGINQS 270
           +WMAIRDMD AA +IG+   + K  AFAVSSF++G+AGAL+   YLG    G +F IN+S
Sbjct: 206 NWMAIRDMDTAASVIGIPVERYKRLAFAVSSFYLGIAGALWAFAYLGTSSAG-SFDINRS 264

Query: 271 FLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGSLGW--DTAIAAHFEFVVLGGL 328
           F +LF+IIIGG+GSI G+  GAAFI L P+LL +      G   D     + + ++ G L
Sbjct: 265 FQILFIIIIGGMGSIAGNFIGAAFISLTPILLSHAGQWLFGGNVDAGQLQNLQKILFGCL 324

Query: 329 IIFFLIVEPHGLARLWQLAKEKLRLWP 355
           II+FLI EP GL RL    +E++R+WP
Sbjct: 325 IIWFLIKEPEGLVRLLGDLRERIRVWP 351