Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 355 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas fluorescens SBW25

 Score =  341 bits (874), Expect = 2e-98
 Identities = 176/357 (49%), Positives = 238/357 (66%), Gaps = 7/357 (1%)

Query: 1   MFYREAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWA 60
           M Y+E G   TSY A+ +TF +  DR+  +L+L  A   +P++ NDYW SA++VP L+ +
Sbjct: 1   MLYQEVGQISTSYAAERRTFRLRQDRIGLWLLLGFAFFALPWLGNDYWFSAILVPLLVLS 60

Query: 61  IAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVL 120
           +A +GLN+LTGY GQ+SLG+  FMAVGA+A Y L    P L + +   LGGVI A V VL
Sbjct: 61  LAGLGLNLLTGYAGQLSLGSAAFMAVGAFAAYNLHLRVPGLPLLVSFALGGVIAALVAVL 120

Query: 121 FGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNA 180
           FGLPSLRIKGFYL VATLAAQF + W+  +  WF N +ASG I +P   + G   + P  
Sbjct: 121 FGLPSLRIKGFYLLVATLAAQFVVEWVLTRFSWFTNDNASGVITSPPLLVAGLDFSSPRG 180

Query: 181 DAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVS 240
               +Y+  L  +  L WL +NL R  +GR+WMA+RDMD AA +IG+  LK KL AFA+S
Sbjct: 181 ----RYVLTLTLVAALFWLGKNLVRSELGRNWMAVRDMDTAAAVIGIRLLKTKLLAFAIS 236

Query: 241 SFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPV 300
            F++GVAG+L+   YLG VE    F +++SF VLF+IIIGGLGS+ G+  GAAFIVL P+
Sbjct: 237 GFYLGVAGSLWAFAYLGTVE-PHGFDLSRSFQVLFIIIIGGLGSVLGNFLGAAFIVLFPI 295

Query: 301 LLKNV--MVGSLGWDTAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWP 355
           LL N+  ++ +   D     + + ++ G LII FLI EP GLARLWQ  +++ R+WP
Sbjct: 296 LLGNLFALLPAGLMDAGQLENIQKMLFGALIIAFLIKEPEGLARLWQRFRQRARVWP 352