Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 334 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  369 bits (946), Expect = e-107
 Identities = 192/363 (52%), Positives = 243/363 (66%), Gaps = 34/363 (9%)

Query: 1   MFYREAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWA 60
           MFYRE G FKT+Y AD Q F                        +DY   A+++PFLI++
Sbjct: 1   MFYRENGQFKTTYRADQQIF------------------------SDYLMRAILIPFLIFS 36

Query: 61  IAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVL 120
           +AA+G+NIL GYCGQ+SLG+G FMAVGAY  Y      P + +   ++LGG+     G+L
Sbjct: 37  LAAVGVNILVGYCGQISLGSGAFMAVGAYGAYNFFVRVPGMPLIPALILGGLCATFFGIL 96

Query: 121 FGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNA 180
           FGLPSLR++G YLAVATLAAQFF  W+F ++ WF   + SG +      +FG     P  
Sbjct: 97  FGLPSLRVRGLYLAVATLAAQFFADWMFLRIKWFTLDTPSGSVAVSNLQVFGL----PLE 152

Query: 181 DAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVS 240
            AA KYLFCLA L V+A LA+NL R  IGR WMAIRDMD+AA +IG+ P+ AKL+AFAVS
Sbjct: 153 SAASKYLFCLAVLAVIALLAKNLVRSAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVS 212

Query: 241 SFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPV 300
           SF +GVAGAL+  VYLGA E   AF ++ SF +LFM+IIGGLGSI GS  GAAFIV+LP+
Sbjct: 213 SFIIGVAGALWAFVYLGAWE-PSAFSVDYSFRLLFMVIIGGLGSIMGSFFGAAFIVVLPI 271

Query: 301 LLKNVM---VGSLGWD--TAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWP 355
            L   +    G  G++  T   +H E ++ GGLI++FLIVEPHGLARLW + K+KLRLWP
Sbjct: 272 ALSQFLPFVAGLFGFEISTTAVSHAELMIFGGLIVWFLIVEPHGLARLWSIGKQKLRLWP 331

Query: 356 FPH 358
           FPH
Sbjct: 332 FPH 334