Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 358 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  385 bits (990), Expect = e-112
 Identities = 193/363 (53%), Positives = 253/363 (69%), Gaps = 10/363 (2%)

Query: 1   MFYREAGDFKTSYVADSQTFPIAFDRMRYYLVLAVAVGIIPFVINDYWASAVMVPFLIWA 60
           MFYRE G FKT+Y AD Q FPI  DR   +  +A A   +P + ++Y   A+++PFLI +
Sbjct: 1   MFYRENGQFKTTYRADQQIFPITQDRRMVWAFIAFAFIAVPLLADEYLLRAILIPFLIMS 60

Query: 61  IAAIGLNILTGYCGQVSLGTGGFMAVGAYACYKLMTAFPDLNIAICVLLGGVITAAVGVL 120
           +AA+G+NIL GYCGQ+SLG+G FMAVGAY  Y      P + +   ++LGG+     G+L
Sbjct: 61  LAALGVNILVGYCGQISLGSGAFMAVGAYGAYNFFVRVPGMPLIPALILGGLCATFFGIL 120

Query: 121 FGLPSLRIKGFYLAVATLAAQFFLVWLFNKVPWFYNYSASGQINAPERTMFGYAITGPNA 180
           FGLPSLR++G YLAVATLAAQFF  W+F ++ WF   + SG ++     +FG+++     
Sbjct: 121 FGLPSLRVRGLYLAVATLAAQFFADWMFLRIKWFTLDTPSGSVSVSNLQVFGFSL----E 176

Query: 181 DAAPKYLFCLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVS 240
            AA KYLFCLA L V+A LA+NL R  IGR WMAIRDMD+AA +IG+ P+ AKL+AFAVS
Sbjct: 177 SAAGKYLFCLAVLVVIALLAKNLVRSAIGREWMAIRDMDVAAAVIGIRPMYAKLSAFAVS 236

Query: 241 SFFVGVAGALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPV 300
           SF +GVAGAL+  V+L A E   AF ++ SF +LFM+IIGGLGSI GS  GAAFIV+LP+
Sbjct: 237 SFIIGVAGALWAFVHLSAWEPA-AFSVDVSFRLLFMVIIGGLGSIVGSFFGAAFIVVLPI 295

Query: 301 LLKNVMVGS-----LGWDTAIAAHFEFVVLGGLIIFFLIVEPHGLARLWQLAKEKLRLWP 355
            L  V+  +     +   T   +H EF+V G LI++FLIVEPHGL +LW L K+KLR+WP
Sbjct: 296 FLNQVLPAAGALVGIEISTVAVSHAEFMVFGALIVWFLIVEPHGLGKLWSLGKQKLRIWP 355

Query: 356 FPH 358
           FPH
Sbjct: 356 FPH 358