Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 425 a.a., Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  140 bits (353), Expect = 6e-38
 Identities = 101/330 (30%), Positives = 167/330 (50%), Gaps = 41/330 (12%)

Query: 31  LVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGAYA 90
           LV+AVA    PF+++   +  +    +I+ I  +GLN++ G  G + LG GGF A+GAY 
Sbjct: 97  LVIAVAW---PFMVSR-GSVDIATMTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYT 152

Query: 91  CYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLA-AQFFLVWLFN 149
            + L+  +  L    C+ L G+++AA G L G P LR++G YLA+ TL   +   + L N
Sbjct: 153 -FALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLN 211

Query: 150 KVPWFYNYSASGQINAPERTMFGYAIT---------------GPNADAAPK----YLFCL 190
                   +   QI  P+ T+FG   +               G   D + +    YL  L
Sbjct: 212 NTEITGGPNGISQI--PKPTLFGLEFSRSTREGGWDTFSNFFGVKYDPSDRVIFLYLVAL 269

Query: 191 AFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAGAL 250
             + +  ++   L R  +GR+W A+R+ +IA   +G++P + KLTAF +S+ F G AG L
Sbjct: 270 LLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPTRIKLTAFTISAAFAGFAGTL 329

Query: 251 FFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVGSL 310
            F+   G V   E+F   +S  VL ++++GG+GS F  +  A  +V+   L+++      
Sbjct: 330 -FAARQGFVS-PESFTFAESAFVLAIVVLGGMGSQFAVILAAVLLVVSRELMRDF----- 382

Query: 311 GWDTAIAAHFEFVVLGGLIIFFLIVEPHGL 340
                    +  ++LGGL++  +I  P GL
Sbjct: 383 -------NEYSMLMLGGLMVLMMIWRPQGL 405