Pairwise Alignments

Query, 358 a.a., inner-membrane translocator (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 425 a.a., ABC-type branched-chain amino acid transport system, permease component from Enterobacter asburiae PDN3

 Score =  144 bits (364), Expect = 3e-39
 Identities = 101/332 (30%), Positives = 164/332 (49%), Gaps = 38/332 (11%)

Query: 29  YYLVLAVAVGIIPFVINDYWASAVMVPFLIWAIAAIGLNILTGYCGQVSLGTGGFMAVGA 88
           + + L VA    PFV++        +  +I+ I  +GLN++ G  G + LG GGF A+GA
Sbjct: 92  FLVALLVAAVAWPFVVSRGTVDIATLT-MIYVILGLGLNVVVGLSGLLVLGYGGFYAIGA 150

Query: 89  YACYKLMTAFPDLNIAICVLLGGVITAAVGVLFGLPSLRIKGFYLAVATLA-AQFFLVWL 147
           Y  + L+  +  L    C+ L G+++AA G L G P LR++G YLA+ TL   +   + L
Sbjct: 151 YT-FALLNHYYGLGFWTCLPLAGLVSAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILL 209

Query: 148 FNKVPWFYNYSASGQINAPERTMFGYAIT---------------GPNADAAPK----YLF 188
            N        +   QI  P+ T FG   +               G   D + +    YL 
Sbjct: 210 LNNTEVTGGPNGISQI--PKPTFFGLEFSRTAREGGWDTFSNFFGVKYDPSDRVIWLYLV 267

Query: 189 CLAFLFVLAWLARNLTRGTIGRSWMAIRDMDIAAEIIGVNPLKAKLTAFAVSSFFVGVAG 248
            L  + +  ++   L R  +GR+W A+R+ +IA   +G+NP + KLTAF +S+ F G AG
Sbjct: 268 ALLLVVITLFVINRLLRMPLGRAWEALREDEIACRSLGLNPTRIKLTAFTISAAFAGFAG 327

Query: 249 ALFFSVYLGAVEVGEAFGINQSFLVLFMIIIGGLGSIFGSLAGAAFIVLLPVLLKNVMVG 308
            L F+   G V   E+F   +S  VL ++++GG+GS F  +  A  +V+   L+++    
Sbjct: 328 TL-FAARQGFVS-PESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDF--- 382

Query: 309 SLGWDTAIAAHFEFVVLGGLIIFFLIVEPHGL 340
                      +  ++LGGL++  +I  P GL
Sbjct: 383 ---------NEYSMLMLGGLMVLMMIWRPQGL 405