Pairwise Alignments

Query, 432 a.a., polar amino acid ABC transporter, inner membrane subunit (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 311 a.a., Inner membrane amino-acid ABC transporter permease protein YhdY from Azospirillum sp. SherDot2

 Score =  202 bits (514), Expect = 1e-56
 Identities = 107/238 (44%), Positives = 149/238 (62%), Gaps = 3/238 (1%)

Query: 190 ATLLFWIFISPLAVNALSSVVALSLPQVESRFIGGFMINFILGTSGIALSLPLGIALALG 249
           ATL  W+F   LA   L        P V +    G  ++ +L   G+  + PL + LAL 
Sbjct: 75  ATLWLWLF--GLAAALLLLTGGPGGPAVPTERWSGLPVSLLLAVVGLVGAFPLAVLLALA 132

Query: 250 RQSNLPIIKGVCVVFIEFIRGVPLITLLFVASVMLAYFLPPGTSFDLVLRVIIMITLFAS 309
           R+S++  ++ + V+FIE  RGVPLI +L+VA+++L   LP G + D +LR  I I LF S
Sbjct: 133 RRSSMGGVRTLAVLFIEVTRGVPLIAVLYVATLLLPLMLPAGAAIDKLLRAQIAIVLFVS 192

Query: 310 AYIAEAIRGGLAALPRGQYEAGDSLGLDYWQSMRLIILPQALKISIPSIVNIAIGLFKDT 369
           AY+AE +R GL ++P GQYEA  +LG+ YWQSMRL+ILPQAL+  IPSIV +AIGLF+DT
Sbjct: 193 AYLAEIVRAGLQSIPAGQYEAAQALGIGYWQSMRLVILPQALRTVIPSIVTLAIGLFQDT 252

Query: 370 TLVSIISMFDMLGMIQGPILSSTEWFGVYWELLGFAGVLFFVFCYGISQYSQWLERQL 427
           TL+ +I +FD+L   +        W G Y E  GFA +++   C   S+YS WLER+L
Sbjct: 253 TLIIVIGLFDLLNTAR-TAAKDPAWLGFYDEAFGFAALIYLTVCVIASRYSLWLERRL 309