Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 338 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  334 bits (856), Expect = 2e-96
 Identities = 168/338 (49%), Positives = 223/338 (65%), Gaps = 3/338 (0%)

Query: 3   KSVLFGALAAAGLAATGAAA--DTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVA 60
           K V   A    G+  +GAA    T + V+ RG V CG+ST L GFA  D+ GEWQG DV 
Sbjct: 2   KIVRIAAAMLLGICISGAATAGQTFDAVKKRGIVQCGVSTNLPGFAFTDSKGEWQGIDVD 61

Query: 61  VCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGIN 120
            CRA+AAA+FG+ +     P+T Q RF  L SGE+D+L RNTT T SRD  L L   G+N
Sbjct: 62  TCRAIAAAMFGNASKFKVVPLTTQARFTALQSGEVDVLTRNTTQTMSRDTTLGLIGVGVN 121

Query: 121 YYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEA 180
           +YD QG MV K   V+SA +L GAT+C+  GTTTELNL D+FR   I F+PV + T  E 
Sbjct: 122 FYDSQGIMVTKDANVTSARKLAGATICVLPGTTTELNLTDWFRGLKIEFKPVLLDTVDEI 181

Query: 181 QQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVR 240
           ++ +++G CD  T D S LA +RASF + +++++LPE +SKEPLGP+VR GD  W ++VR
Sbjct: 182 KRAFVSGRCDGITMDKSQLALSRASFANAEKYLILPEALSKEPLGPMVRQGDEAWFNVVR 241

Query: 241 WTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGG 300
           WTLNA++ AEE  ++S NV +++     P I R+LG    LG+ LGL   WA N+IK  G
Sbjct: 242 WTLNAMLEAEEYNLSSKNVDDVSKAAP-PHIQRILGLSPGLGKGLGLDDKWAYNIIKQVG 300

Query: 301 NYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338
           NYGEIF+  +G ++P+ L RGLNA +T GGL+Y  P R
Sbjct: 301 NYGEIFDRSLGASSPMKLERGLNALYTRGGLMYGWPIR 338