Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 342 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  382 bits (982), Expect = e-111
 Identities = 187/331 (56%), Positives = 232/331 (70%)

Query: 8   GALAAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAVAA 67
           GA AA GLA+T  A  TL+ +Q +G + CG+S GL GF   D+NG+  G DV VC AVAA
Sbjct: 12  GATAALGLASTAQAGVTLDAIQKKGFIQCGVSDGLPGFGVPDSNGKMTGIDVDVCHAVAA 71

Query: 68  AVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTGINYYDGQGF 127
           AVFGD + V F  +T + RF  L SGEIDM++RNTTWT SRD  + L FTG+ YYDG GF
Sbjct: 72  AVFGDASKVKFTQLTAKERFTALQSGEIDMISRNTTWTSSRDSGMGLVFTGVTYYDGIGF 131

Query: 128 MVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQYLAG 187
           +V   LGV+ A +LDGATVCIQ GTTTELN++D+FR N + + P+   TA E+ +   AG
Sbjct: 132 LVNNKLGVTGAKQLDGATVCIQAGTTTELNVSDYFRTNGMKYTPITFDTADESAKGLEAG 191

Query: 188 ACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLNALI 247
            CDV TTD SGL A R     PDE VVLPE+ISKEPLGPLVR GD+EW  IV+WTL A++
Sbjct: 192 RCDVLTTDQSGLYAQRIKMAHPDEFVVLPEVISKEPLGPLVRKGDDEWFSIVKWTLFAML 251

Query: 248 AAEELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGGNYGEIFE 307
            AEE+G+TS NV E A  T NP+I RLLG +G  G+ L L  DW V ++K  GNYGE+FE
Sbjct: 252 NAEEMGITSQNVEEQAKTTKNPDIARLLGADGEYGKDLKLRKDWVVQIVKQVGNYGEVFE 311

Query: 308 THIGENTPIGLARGLNAQWTEGGLLYAPPFR 338
            +IG+ + + + RGLNA W  GG+ YAPP R
Sbjct: 312 RNIGQGSVLKIKRGLNALWNNGGIQYAPPVR 342