Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 343 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas fluorescens SBW25

 Score =  353 bits (907), Expect = e-102
 Identities = 174/334 (52%), Positives = 229/334 (68%), Gaps = 1/334 (0%)

Query: 6   LFGALAAAGLAATGAAADTLEEVQARGAVNCGISTGLVGFASQDANGEWQGFDVAVCRAV 65
           +  A A  G++    A  TL+ VQ +G V CG+S GL GF+  DA+G+  G D  VCRAV
Sbjct: 10  IVSAAAVLGVSGFAQAGATLDAVQKKGFVQCGVSDGLPGFSVPDASGKILGIDADVCRAV 69

Query: 66  AAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTG-INYYDG 124
           AAAVFGD T V F+ +  + RF  L SGE+D+L+RNTT T SRD  + L+F G I YYDG
Sbjct: 70  AAAVFGDATKVKFSQLNAKERFTALQSGEVDILSRNTTMTSSRDAGMGLKFPGFITYYDG 129

Query: 125 QGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTASEAQQQY 184
            GF+V   LGV SA ELDGAT+CIQ GTTTELN++D+FR NN+ + P+   T+ E+ +  
Sbjct: 130 IGFLVNNKLGVKSAKELDGATICIQAGTTTELNVSDYFRGNNLKYTPITFDTSDESAKSL 189

Query: 185 LAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDIVRWTLN 244
            +G CDV T+D S L A R+   +P ++VVLPE ISKEPLGP+VR+GD+EW  IVRW   
Sbjct: 190 ESGRCDVLTSDKSQLFAQRSKLAAPKDYVVLPETISKEPLGPVVRNGDDEWLAIVRWVGY 249

Query: 245 ALIAAEELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKAGGNYGE 304
           A++ AEE G+TS NV   A  T NP++ RLLG +G  G+ L +  DW V ++K  GNYGE
Sbjct: 250 AMLNAEEAGITSKNVEAEAKSTKNPDVARLLGADGEYGKDLKVKKDWVVQIVKQVGNYGE 309

Query: 305 IFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338
           +FE ++G++TP+ + RGLNA W  GG+ YAPP R
Sbjct: 310 VFERNLGKSTPLEIDRGLNALWNNGGIQYAPPVR 343