Pairwise Alignments

Query, 338 a.a., cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) from Dinoroseobacter shibae DFL-12

Subject, 340 a.a., amino acid ABC transporter substrate-binding protein from Bosea sp. OAE506

 Score =  331 bits (849), Expect = 1e-95
 Identities = 173/340 (50%), Positives = 221/340 (65%), Gaps = 3/340 (0%)

Query: 1   MKKSVLFGALAA-AGLAATGAAAD-TLEEVQARGAVNCGISTGLVGFASQDANGEWQGFD 58
           + K    G LAA A LAA+ A+A  TL+ V+ RG V CG+S    G++  D  G  +GFD
Sbjct: 2   ISKIATLGFLAAVAALAASPASAQATLDVVKKRGKVLCGVSPSSAGYSYADDKGVRKGFD 61

Query: 59  VAVCRAVAAAVFGDPTAVNFNPVTNQVRFEVLNSGEIDMLARNTTWTFSRDVDLKLEFTG 118
             VCRAV++AVFG P  V F P+   +RF+ L SGEID+L+R TT TFSRD  L L+F  
Sbjct: 62  SDVCRAVSSAVFGAPDKVEFVPLNTNIRFQALQSGEIDVLSRQTTMTFSRDNSLGLDFGP 121

Query: 119 INYYDGQGFMVPKALGVSSATELDGATVCIQKGTTTELNLADFFRANNISFEPVPISTAS 178
           + +YDGQG MV   LGV SA+EL  A +C+  GTTT  NL D+F+   I +E V     +
Sbjct: 122 VVFYDGQGLMVNAKLGVKSASELSQAAICLLPGTTTLQNLEDYFKPRGIKYESVVFEDNN 181

Query: 179 EAQQQYLAGACDVYTTDASGLAATRASFESPDEHVVLPEIISKEPLGPLVRHGDNEWGDI 238
           E +  + +G CDV TTD S LA+ RA    P + V+LPE ISKEPL P+VR  D+ W DI
Sbjct: 182 EWRNAFFSGRCDVITTDRSDLASVRAVANDPKQFVILPETISKEPLAPVVRQNDSNWKDI 241

Query: 239 VRWTLNALIAAEELGVTSANVAELAAGTDNPEINRLLGTEGNLGEQLGLSADWAVNVIKA 298
           V W++  LIAAEE G+T ANV E     + PE+ R+LG  G+LG+ L L   WA N+IK 
Sbjct: 242 VSWSVYTLIAAEEYGITQANVDEKLQSKE-PEVQRMLGVTGDLGKMLNLDNKWAYNIIKQ 300

Query: 299 GGNYGEIFETHIGENTPIGLARGLNAQWTEGGLLYAPPFR 338
            GNYGE+FE  +GE TP+GL RG N  WT+GGLLY+PPFR
Sbjct: 301 NGNYGELFERSLGEKTPLGLTRGPNQLWTKGGLLYSPPFR 340